RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 LRRC26Q2I0M4 334 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 SLC9C2Q5TAH2 1124 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM3-201ENST00000271850 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 RPAP3Q9H6T3 665 aaPredicted RBP10.88□□□□□ -0.67
TPM3-201ENST00000271850 ZNF236Q9UL36 1845 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 VCANP13611 3396 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 APBB1O00213 710 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 GOLIM4O00461 696 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 HOXC6P09630 235 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 PTPREP23469 700 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 TTC6Q86TZ1 520 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 GTF3C2Q8WUA4 911 aaPredicted RBP10.87□□□□□ -0.67
TPM3-201ENST00000271850 DNAJC2Q99543 621 aaKnown RBP10.87□□□□□ -0.67
TPM3-201ENST00000271850 FEZ1Q99689 392 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 ARMT1Q9H993 441 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
TPM3-201ENST00000271850 BAZ2AQ9UIF9 1905 aaKnown RBP10.87□□□□□ -0.67
TPM3-201ENST00000271850 SPTBN5Q9NRC6 3674 aaKnown RBP10.86□□□□□ -0.67
TPM3-201ENST00000271850 AKR1B1P15121 316 aa10.86□□□□□ -0.67
TPM3-201ENST00000271850 PDE3AQ14432 1141 aa10.86□□□□□ -0.67
TPM3-201ENST00000271850 C20orf194Q5TEA3 1177 aa10.86□□□□□ -0.67
TPM3-201ENST00000271850 CERS3Q8IU89 383 aa10.86□□□□□ -0.67
TPM3-201ENST00000271850 KIF1BPQ96EK5 621 aa10.86□□□□□ -0.67
TPM3-201ENST00000271850 MOV10L1Q9BXT6 1211 aaKnown RBP10.86□□□□□ -0.67
TPM3-201ENST00000271850 MCM9Q9NXL9 1143 aa10.86□□□□□ -0.67
TPM3-201ENST00000271850 SLC15A5A6NIM6 579 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 COBLO75128 1261 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 POLR3DP05423 398 aaPredicted RBP10.85□□□□□ -0.67
TPM3-201ENST00000271850 CYBAP13498 195 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 CYP2C19P33261 490 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 ADD2P35612 726 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 USP14P54578 494 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 TMED8Q6PL24 325 aaPredicted RBP10.85□□□□□ -0.67
TPM3-201ENST00000271850 Q7L0L9 218 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 TRMT44Q8IYL2 757 aaKnown RBP10.85□□□□□ -0.67
TPM3-201ENST00000271850 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM3-201ENST00000271850 BOLA2Q9H3K6 86 aa10.85□□□□□ -0.67
TPM3-201ENST00000271850 GREB1LQ9C091 1923 aaPredicted RBP10.85□□□□□ -0.67
TPM3-201ENST00000271850 LTBP2Q14767 1821 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 MBD4O95243 580 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 TTF1Q15361 905 aaPredicted RBP10.84□□□□□ -0.67
TPM3-201ENST00000271850 LRIT3Q3SXY7 679 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 RPAP2Q8IXW5 612 aaPredicted RBP10.84□□□□□ -0.67
TPM3-201ENST00000271850 CLASRPQ8N2M8 674 aaKnown RBP10.84□□□□□ -0.67
TPM3-201ENST00000271850 ATG4CQ96DT6 458 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 HAUS7Q99871 368 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 CRNKL1Q9BZJ0 848 aaKnown RBP10.84□□□□□ -0.67
TPM3-201ENST00000271850 SPATC1LQ9H0A9 340 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 CABP5Q9NP86 173 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 PAG1Q9NWQ8 432 aa10.84□□□□□ -0.67
TPM3-201ENST00000271850 DDX20Q9UHI6 824 aaKnown RBP10.84□□□□□ -0.67
TPM3-201ENST00000271850 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
TPM3-201ENST00000271850 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
TPM3-201ENST00000271850 ATP5JP18859 108 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 ERCC3P19447 782 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 ADORA2AP29274 412 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 HSP90AB4PQ58FF6 505 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 C12orf60Q5U649 245 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 WDR78Q5VTH9 848 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 DIEXFQ68CQ4 756 aaKnown RBP10.83□□□□□ -0.68
TPM3-201ENST00000271850 TDHQ8IZJ6 230 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 PUS7LQ9H0K6 701 aaKnown RBP10.83□□□□□ -0.68
TPM3-201ENST00000271850 TMX2Q9Y320 296 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 MYH7P12883 1935 aa10.83□□□□□ -0.68
TPM3-201ENST00000271850 MYH8P13535 1937 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 MPHOSPH10O00566 681 aaKnown RBP10.82□□□□□ -0.68
TPM3-201ENST00000271850 IFIT2P09913 472 aaKnown RBP10.82□□□□□ -0.68
TPM3-201ENST00000271850 CDK8P49336 464 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 CCNA1P78396 465 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
TPM3-201ENST00000271850 COG2Q14746 738 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 TMEM132BQ14DG7 1078 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 PRAMEF19Q5SWL8 479 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 ANO1Q5XXA6 986 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 TMEM179Q6ZVK1 233 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 C16orf86Q6ZW13 317 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 REPS2Q8NFH8 660 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 LPAR1Q92633 364 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 BCL11AQ9H165 835 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 VCPKMTQ9H867 229 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 FBXO28Q9NVF7 368 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 DDX19BQ9UMR2 479 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 ADAMTS5Q9UNA0 930 aa10.82□□□□□ -0.68
TPM3-201ENST00000271850 CUL9Q8IWT3 2517 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 USP17L21D6R901 530 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 RAB11FIP3O75154 756 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 ICA1Q05084 483 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 GJC2Q5T442 439 aaPredicted RBP10.81□□□□□ -0.68
TPM3-201ENST00000271850 MFSD14CQ5VZR4 134 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 OLFML2BQ68BL8 750 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 CTR9Q6PD62 1173 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
TPM3-201ENST00000271850 SHCBP1Q8NEM2 672 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 TANGO6Q9C0B7 1094 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms