RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 PPP1R7Q15435 360 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 CFAP221Q4G0U5 840 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 HAUS4Q9H6D7 363 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 AP5Z1O43299 807 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 SMIM24O75264 130 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 NR5A1Q13285 461 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 E4F1Q66K89 784 aaPredicted RBP13.41□□□□□ -0.26
ERBB2-201ENST00000269571 MGARPQ8TDB4 240 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 WDR24Q96S15 920 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 CASP1P29466 404 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 CYP27A1Q02318 531 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 DAAM2Q86T65 1068 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 STK38LQ9Y2H1 464 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 MAP3K4Q9Y6R4 1608 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 GUCY2DQ02846 1103 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 FCHSD1Q86WN1 690 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 GSPT2Q8IYD1 628 aaKnown RBP13.4□□□□□ -0.26
ERBB2-201ENST00000269571 CSRNP2Q9H175 543 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 CLTAP09496 248 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 ELF1P32519 619 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 SLC7A5Q01650 507 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 PI16Q6UXB8 463 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 MIPOL1Q8TD10 442 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 PUS3Q9BZE2 481 aaKnown RBP13.4□□□□□ -0.26
ERBB2-201ENST00000269571 MAN1B1Q9UKM7 699 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 MRFAP1Q9Y605 127 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 RTL9Q8NET4 1388 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 RPAP1Q9BWH6 1393 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-201ENST00000269571 MXRA7P84157 204 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 ADAT2Q7Z6V5 191 aaKnown RBP13.4□□□□□ -0.26
ERBB2-201ENST00000269571 NELFCDQ8IXH7 590 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 CCDC51Q96ER9 411 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
ERBB2-201ENST00000269571 KIF3CO14782 793 aa13.4□□□□□ -0.27
ERBB2-201ENST00000269571 SRGAP2O75044 1071 aa13.4□□□□□ -0.27
ERBB2-201ENST00000269571 GSTO1P78417 241 aa13.4□□□□□ -0.27
ERBB2-201ENST00000269571 C2orf54Q08AI8 447 aa13.4□□□□□ -0.27
ERBB2-201ENST00000269571 PLS1Q14651 629 aa13.4□□□□□ -0.27
ERBB2-201ENST00000269571 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.27
ERBB2-201ENST00000269571 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-201ENST00000269571 UNC13BO14795 1591 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CTNNA1P35221 906 aaKnown RBP13.39□□□□□ -0.27
ERBB2-201ENST00000269571 COPB1P53618 953 aaKnown RBP13.39□□□□□ -0.27
ERBB2-201ENST00000269571 ATP11AP98196 1134 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 LRRC23Q53EV4 343 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-201ENST00000269571 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 DPF2Q92785 391 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
ERBB2-201ENST00000269571 C6orf50Q9HD87 102 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CALM1P0DP23 149 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CALM2P0DP24 149 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CALM3P0DP25 149 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 SV2BQ7L1I2 683 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC170Q8IYT3 715 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC160A6NGH7 325 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-201ENST00000269571 ADORA1P30542 326 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CCZ1BP86790 482 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 CCZ1P86791 482 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-201ENST00000269571 MTF1Q14872 753 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 LRRC45Q96CN5 670 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 VCXQ9H320 206 aa13.39□□□□□ -0.27
ERBB2-201ENST00000269571 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 DHX40Q8IX18 779 aaKnown RBP13.38□□□□□ -0.27
ERBB2-201ENST00000269571 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC26Q8TAB7 109 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 TBC1D5Q92609 795 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 POLD4Q9HCU8 107 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 CHGBP05060 677 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 IQCB1Q15051 598 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 PSMD1Q99460 953 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 DPH5Q9H2P9 285 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 MTRF1LQ9UGC7 380 aaKnown RBP13.38□□□□□ -0.27
ERBB2-201ENST00000269571 RPS6KA1Q15418 735 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 RPGRIP1Q96KN7 1286 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 LRRC27Q9C0I9 530 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 TFCP2L1Q9NZI6 479 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 TPX2Q9ULW0 747 aaKnown RBP13.38□□□□□ -0.27
ERBB2-201ENST00000269571 MAST3O60307 1309 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 KLHL30Q0D2K2 578 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 PTGDRQ13258 359 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 NUP58Q9BVL2 599 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-201ENST00000269571 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.38□□□□□ -0.27
ERBB2-201ENST00000269571 ERBB3P21860 1342 aa13.38□□□□□ -0.27
ERBB2-201ENST00000269571 KCNK3O14649 394 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
ERBB2-201ENST00000269571 NAA35Q5VZE5 725 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 CACNA2D3Q8IZS8 1091 aa13.37□□□□□ -0.27
ERBB2-201ENST00000269571 FMR1NBQ8N0W7 255 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms