RNA–Protein interactions for RNA: ENST00000269471.9

MBD1-202, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MBD1, Length 2,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-202ENST00000269471 SFPQP23246 707 aaKnown RBP eCLIP18.33■□□□□ 0.52
MBD1-202ENST00000269471 PLA2G4AP47712 749 aa18.33■□□□□ 0.52
MBD1-202ENST00000269471 FUT2Q10981 343 aa18.33■□□□□ 0.52
MBD1-202ENST00000269471 EARS2Q5JPH6 523 aaKnown RBP18.33■□□□□ 0.52
MBD1-202ENST00000269471 OSBPL5Q9H0X9 879 aaPredicted RBP18.33■□□□□ 0.52
MBD1-202ENST00000269471 MMP1P03956 469 aa18.32■□□□□ 0.52
MBD1-202ENST00000269471 SHROOM1Q2M3G4 852 aaPredicted RBP18.32■□□□□ 0.52
MBD1-202ENST00000269471 APOBEC3HQ6NTF7 200 aaKnown RBP18.32■□□□□ 0.52
MBD1-202ENST00000269471 SLF2Q8IX21 1173 aa18.32■□□□□ 0.52
MBD1-202ENST00000269471 C7orf43Q8WVR3 580 aa18.32■□□□□ 0.52
MBD1-202ENST00000269471 ZNF277Q9NRM2 450 aaPredicted RBP18.32■□□□□ 0.52
MBD1-202ENST00000269471 CRKP46108 304 aa18.32■□□□□ 0.52
MBD1-202ENST00000269471 GPKOWQ92917 476 aaPredicted RBP eCLIP18.32■□□□□ 0.52
MBD1-202ENST00000269471 FAM163AQ96GL9 167 aaPredicted RBP18.32■□□□□ 0.52
MBD1-202ENST00000269471 NAT10Q9H0A0 1025 aaKnown RBP18.32■□□□□ 0.52
MBD1-202ENST00000269471 CABP5Q9NP86 173 aa18.32■□□□□ 0.52
MBD1-202ENST00000269471 DNAI1Q9UI46 699 aa18.32■□□□□ 0.52
MBD1-202ENST00000269471 RAD17O75943 681 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 CCDC93Q567U6 631 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 TMTC3Q6ZXV5 915 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 BRAPQ7Z569 592 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 NEK11Q8NG66 645 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 TEKT1Q969V4 418 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 LRRC37AA6NMS7 1700 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 KIAA1551Q9HCM1 1747 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 ADAMTSL1Q8N6G6 1762 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
MBD1-202ENST00000269471 NDUFA8P51970 172 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 MAST2Q6P0Q8 1798 aa18.31■□□□□ 0.52
MBD1-202ENST00000269471 YDJCA8MPS7 323 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 SEC31AO94979 1220 aaKnown RBP18.3■□□□□ 0.52
MBD1-202ENST00000269471 PLCG2P16885 1265 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 VAT1LQ9HCJ6 419 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 KCND1Q9NSA2 647 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 ZRSR1Q15695 479 aaKnown RBP18.3■□□□□ 0.52
MBD1-202ENST00000269471 NOSTRINQ8IVI9 506 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 MTA3Q9BTC8 594 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 EPC1Q9H2F5 836 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 SCAF8Q9UPN6 1271 aaKnown RBP18.3■□□□□ 0.52
MBD1-202ENST00000269471 TOB1P50616 345 aaPredicted RBP18.3■□□□□ 0.52
MBD1-202ENST00000269471 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
MBD1-202ENST00000269471 DACT2Q5SW24 774 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
MBD1-202ENST00000269471 ZBTB12Q9Y330 459 aaPredicted RBP18.3■□□□□ 0.52
MBD1-202ENST00000269471 STK36Q9NRP7 1315 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 RAD21O60216 631 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 GRIN1Q05586 938 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 ISM2Q6H9L7 571 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 C16orf86Q6ZW13 317 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
MBD1-202ENST00000269471 WASF1Q92558 559 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 UBXN4Q92575 508 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 PCDHB6Q9Y5E3 794 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 WNT7AO00755 349 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 AKR1B1P15121 316 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 PTPN21Q16825 1174 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 SLC35G1Q2M3R5 365 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 TMCO3Q6UWJ1 677 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 CCDC150Q8NCX0 1101 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 RNF26Q9BY78 433 aaPredicted RBP18.29■□□□□ 0.52
MBD1-202ENST00000269471 POLR3EQ9NVU0 708 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.29■□□□□ 0.52
MBD1-202ENST00000269471 CNTNAP5Q8WYK1 1306 aa18.29■□□□□ 0.52
MBD1-202ENST00000269471 MPHOSPH10O00566 681 aaKnown RBP18.28■□□□□ 0.52
MBD1-202ENST00000269471 FMR1NBQ8N0W7 255 aaPredicted RBP18.28■□□□□ 0.52
MBD1-202ENST00000269471 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
MBD1-202ENST00000269471 TTLL6Q8N841 843 aa18.28■□□□□ 0.52
MBD1-202ENST00000269471 MRPS27Q92552 414 aaKnown RBP18.28■□□□□ 0.52
MBD1-202ENST00000269471 TDRD3Q9H7E2 651 aaKnown RBP18.28■□□□□ 0.52
MBD1-202ENST00000269471 IMPACTQ9P2X3 320 aa18.28■□□□□ 0.52
MBD1-202ENST00000269471 SCN9AQ15858 1988 aa18.28■□□□□ 0.52
MBD1-202ENST00000269471 DDAH1O94760 285 aa18.28■□□□□ 0.52
MBD1-202ENST00000269471 LMOD1P29536 600 aaPredicted RBP18.28■□□□□ 0.52
MBD1-202ENST00000269471 KCNA3P22001 575 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 GOLGA8FQ08AF8 430 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 GOLGA8DPQ0D2H9 430 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 MNS1Q8NEH6 495 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 UBA5Q9GZZ9 404 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 ECM29Q5VYK3 1845 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 PSDA5PKW4 1024 aaPredicted RBP18.27■□□□□ 0.52
MBD1-202ENST00000269471 TULP2O00295 520 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 FANCGO15287 622 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 PRPF3O43395 683 aaKnown RBP18.27■□□□□ 0.52
MBD1-202ENST00000269471 URI1O94763 535 aaPredicted RBP18.27■□□□□ 0.52
MBD1-202ENST00000269471 CALM1P0DP23 149 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 CALM2P0DP24 149 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 CALM3P0DP25 149 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 DGKHQ86XP1 1220 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 FAM177A1Q8N128 213 aaPredicted RBP18.27■□□□□ 0.52
MBD1-202ENST00000269471 RASGRP4Q8TDF6 673 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 MAP3K14Q99558 947 aa18.27■□□□□ 0.52
MBD1-202ENST00000269471 ZCCHC17Q9NP64 241 aaKnown RBP18.27■□□□□ 0.52
MBD1-202ENST00000269471 FRMPD2Q68DX3 1309 aaPredicted RBP18.27■□□□□ 0.52
MBD1-202ENST00000269471 ETF1P62495 437 aaKnown RBP18.27■□□□□ 0.51
MBD1-202ENST00000269471 ADALQ6DHV7 355 aa18.27■□□□□ 0.51
MBD1-202ENST00000269471 PLCD3Q8N3E9 789 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms