RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 NEDD1Q8NHV4 660 aa12.73□□□□□ -0.37
MSH3-201ENST00000265081 EPSTI1Q96J88 318 aa12.73□□□□□ -0.37
MSH3-201ENST00000265081 PPP1R13BQ96KQ4 1090 aa12.73□□□□□ -0.37
MSH3-201ENST00000265081 MTRQ99707 1265 aa12.73□□□□□ -0.37
MSH3-201ENST00000265081 TFAP4Q01664 338 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
MSH3-201ENST00000265081 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
MSH3-201ENST00000265081 LAD1O00515 517 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
MSH3-201ENST00000265081 SEPT12Q8IYM1 358 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 TBC1D16Q8TBP0 767 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 PCDHA6Q9UN73 950 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 PCDHA8Q9Y5H6 950 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 LRRC10BA6NIK2 292 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 TSPY2A6NKD2 308 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
MSH3-201ENST00000265081 UBASH3AP57075 661 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 CHAF1AQ13111 956 aaPredicted RBP12.72□□□□□ -0.37
MSH3-201ENST00000265081 PTGDRQ13258 359 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 BLIDQ8IZY5 108 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 ZMYND12Q9H0C1 365 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
MSH3-201ENST00000265081 SERPINB2P05120 415 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 DNTTIP2Q5QJE6 756 aaKnown RBP12.71□□□□□ -0.37
MSH3-201ENST00000265081 STAG2Q8N3U4 1231 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 TBC1D22AQ8WUA7 517 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 ANKIB1Q9P2G1 1089 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 SMC2O95347 1197 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 PLCG2P16885 1265 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 ST5P78524 1137 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 SP8Q8IXZ3 490 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 CCDC24Q8N4L8 307 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
MSH3-201ENST00000265081 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.38
MSH3-201ENST00000265081 ATAD5Q96QE3 1844 aa12.71□□□□□ -0.38
MSH3-201ENST00000265081 ESYT2A0FGR8 921 aa12.71□□□□□ -0.38
MSH3-201ENST00000265081 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.38
MSH3-201ENST00000265081 GRAMD1CQ8IYS0 662 aa12.71□□□□□ -0.38
MSH3-201ENST00000265081 C16orf45Q96MC5 204 aaPredicted RBP12.71□□□□□ -0.38
MSH3-201ENST00000265081 TMEM47Q9BQJ4 181 aa12.71□□□□□ -0.38
MSH3-201ENST00000265081 GGA1Q9UJY5 639 aa12.71□□□□□ -0.38
MSH3-201ENST00000265081 TAOK2Q9UL54 1235 aa12.71□□□□□ -0.38
MSH3-201ENST00000265081 MYL1P05976 194 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 SPATA1Q5VX52 437 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 TMEM232C9JQI7 657 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 hCG_1984214I3L0E3 225 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 SFPQP23246 707 aaKnown RBP eCLIP12.7□□□□□ -0.38
MSH3-201ENST00000265081 NCBP1Q09161 790 aaKnown RBP12.7□□□□□ -0.38
MSH3-201ENST00000265081 FILIP1Q7Z7B0 1213 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 ZNF713Q8N859 430 aaPredicted RBP12.7□□□□□ -0.38
MSH3-201ENST00000265081 BTDP43251 543 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
MSH3-201ENST00000265081 COBLL1Q53SF7 1204 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 REXO1L1PQ8IX06 675 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
MSH3-201ENST00000265081 hCG_1642624A0A1W2PR95 340 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 CDK8P49336 464 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 FAM182BQ5T319 152 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 ZNF287Q9HBT7 754 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 COL2A1P02458 1487 aaPredicted RBP12.69□□□□□ -0.38
MSH3-201ENST00000265081 GTPBP6O43824 516 aaPredicted RBP12.69□□□□□ -0.38
MSH3-201ENST00000265081 NAALADL2Q58DX5 795 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
MSH3-201ENST00000265081 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 NFE2L3Q9Y4A8 694 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 EP400Q96L91 3159 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 USP5P45974 858 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 PROM2Q8N271 834 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
MSH3-201ENST00000265081 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 CCP110O43303 1012 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 ZNF174Q15697 407 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 ISM2Q6H9L7 571 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 PIK3AP1Q6ZUJ8 805 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
MSH3-201ENST00000265081 LIMA1Q9UHB6 759 aaKnown RBP12.68□□□□□ -0.38
MSH3-201ENST00000265081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.68□□□□□ -0.38
MSH3-201ENST00000265081 UFL1O94874 794 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 KCNB1Q14721 858 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 SPECC1LQ69YQ0 1117 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
MSH3-201ENST00000265081 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms