RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 ELP3Q9H9T3 547 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 RRAGCQ9HB90 399 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 NYAP2Q9P242 653 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 CNPY2Q9Y2B0 182 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 RASA1P20936 1047 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 BRDTQ58F21 947 aaPredicted RBP9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 TTC38Q5R3I4 469 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 CERS5Q8N5B7 392 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 PIGSQ96S52 555 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 MTMR4Q9NYA4 1195 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 FEM1BQ9UK73 627 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 ZBTB21Q9ULJ3 1066 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 FAM83BQ5T0W9 1011 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 APOBEC3HQ6NTF7 200 aaKnown RBP9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 ADGRA1Q86SQ6 560 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 TSPY26PQ9H489 355 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 C19orf81C9J6K1 198 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 PRPF3O43395 683 aaKnown RBP9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 DTNBO60941 627 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 CELF2O95319 508 aaKnown RBP9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 STOX1Q6ZVD7 989 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 IDI2Q9BXS1 227 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 LY9Q9HBG7 655 aa9.41□□□□□ -0.9
GTF3C3-201ENST00000263956 GAKO14976 1311 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 CCNT1O60563 726 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 KIF20AO95235 890 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 FDX1P10109 184 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 IDEP14735 1019 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 SYKP43405 635 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 NSUN7Q8NE18 718 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 MRPS27Q92552 414 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 SLF1Q9BQI6 1058 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 MARF1Q9Y4F3 1742 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 BACH1O14867 736 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 CDC37Q16543 378 aaPredicted RBP9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 ARHGEF16Q5VV41 709 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 ANO1Q5XXA6 986 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 NLRX1Q86UT6 975 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 SGMS1Q86VZ5 419 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 EHD4Q9H223 541 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 NRAPQ86VF7 1730 aa9.4□□□□□ -0.9
GTF3C3-201ENST00000263956 PNMA6FA0A0J9YX94 578 aa9.4□□□□□ -0.91
GTF3C3-201ENST00000263956 HUNKP57058 714 aa9.4□□□□□ -0.91
GTF3C3-201ENST00000263956 GNPTABQ3T906 1256 aa9.4□□□□□ -0.91
GTF3C3-201ENST00000263956 FBXO18Q8NFZ0 1043 aa9.4□□□□□ -0.91
GTF3C3-201ENST00000263956 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.91
GTF3C3-201ENST00000263956 BTAF1O14981 1849 aa9.4□□□□□ -0.91
GTF3C3-201ENST00000263956 STAT6P42226 847 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 TOB2Q14106 344 aaPredicted RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 GRM4Q14833 912 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 PRPF38AQ8NAV1 312 aaKnown RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 LPAR1Q92633 364 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 CICQ96RK0 1608 aaPredicted RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L15C9J2P7 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L13C9JLJ4 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L11C9JVI0 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L18D6R9N7 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L22D6RA61 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L17D6RBQ6 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L19D6RCP7 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L20D6RJB6 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 NFKBIEO00221 500 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 HMGCS2P54868 508 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 SP4Q02446 784 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 USP17L24Q0WX57 530 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 CAMK4Q16566 473 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 FILIP1LQ4L180 1135 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 DNTTIP2Q5QJE6 756 aaKnown RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 SCYL3Q8IZE3 742 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 ALDH8A1Q9H2A2 487 aaPredicted RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 ZNF157P51786 506 aaPredicted RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 EXOSC10Q01780 885 aaKnown RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 CUL4AQ13619 759 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 GRIK5Q16478 980 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 MAP1SQ66K74 1059 aaPredicted RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 DPP9Q86TI2 863 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 BRPF3Q9ULD4 1205 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 GLTPD2A6NH11 291 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 DDTLA6NHG4 134 aaPredicted RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 TBCAO75347 108 aaKnown RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 GSE1Q14687 1217 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 NBPF12Q5TAG4 269 aaPredicted RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 RRAGBQ5VZM2 374 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 STXBP4Q6ZWJ1 553 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 IL25Q9H293 177 aa9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 ADD3Q9UEY8 706 aaKnown RBP9.39□□□□□ -0.91
GTF3C3-201ENST00000263956 BTBD18B2RXH4 712 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 DKC1O60832 514 aaKnown RBP eCLIP9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 PLEKHA8P1O95397 391 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 CAP2P40123 477 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 MATR3P43243 847 aaKnown RBP eCLIP9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 SNAPC2Q13487 334 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 RNF214Q8ND24 703 aa9.38□□□□□ -0.91
GTF3C3-201ENST00000263956 FBXO40Q9UH90 709 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms