RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RETREG2Q8NC44 543 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 AENQ8WTP8 325 aaKnown RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 RUFY1Q96T51 708 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 ISCA1Q9BUE6 129 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 HDAC6Q9UBN7 1215 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 TTC26A0AVF1 554 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 LGALS16A8MUM7 142 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 KIAA0754O94854 1291 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 PCCAP05165 728 aaPredicted RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 CSF1RP07333 972 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 MYH7P12883 1935 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 CDC25AP30304 524 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 LIG3P49916 1009 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 MNAT1P51948 309 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 GSCP56915 257 aaPredicted RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 ECM29Q5VYK3 1845 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 OXER1Q8TDS5 423 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 NOC3LQ8WTT2 800 aaKnown RBP13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 STAG1Q8WVM7 1258 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 CAPZA3Q96KX2 299 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 LAMB4A4D0S4 1761 aa13.89□□□□□ -0.19
CHMP2B-201ENST00000263780 RNF225M0QZC1 329 aaPredicted RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 HERVK_113P62684 666 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 GNGT1P63211 74 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 RIN2Q8WYP3 895 aaPredicted RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 SH3GL2Q99962 352 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 TACO1Q9BSH4 297 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 PIH1D3Q9NQM4 214 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 MAGEC2Q9UBF1 373 aaPredicted RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 TRIM10Q9UDY6 481 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 LRP6O75581 1613 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 RTL9Q8NET4 1388 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 CYP27B1O15528 508 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 CLSTN1O94985 981 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 PARP1P09874 1014 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 HNRNPH1P31943 449 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 DNM2P50570 870 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 SKOR1P84550 965 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 TCIRG1Q13488 830 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 MEA1Q16626 185 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 EMBQ6PCB8 327 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 RIPOR2Q9Y4F9 1068 aa13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 PARP4Q9UKK3 1724 aaKnown RBP13.88□□□□□ -0.19
CHMP2B-201ENST00000263780 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 TCRBV5S4A2TA0A5A2 114 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 HSF2BPO75031 334 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 PRLRP16471 622 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 APBA1Q02410 837 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 CTDSPL2Q05D32 466 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 KIF5AQ12840 1032 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 MAP3K12Q12852 859 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 SKIDA1Q1XH10 827 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 ZNF572Q7Z3I7 529 aaPredicted RBP13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 TEX2Q8IWB9 1127 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 ZNF654Q8IZM8 581 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 IQCDQ96DY2 449 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 THAP9Q9H5L6 903 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 JADE2Q9NQC1 790 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 TJP1Q07157 1748 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 USO1O60763 962 aaKnown RBP13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 SRGAP2O75044 1071 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 CSB-PGBD3P0DP91 1061 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 IDEP14735 1019 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 CASP1P29466 404 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 EPHB4P54760 987 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 LDHAL6AQ6ZMR3 332 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 SND1Q7KZF4 910 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 CCDC82Q8N4S0 544 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 TRIM58Q8NG06 486 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 UBAC1Q9BSL1 405 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 PHF20Q9BVI0 1012 aa13.87□□□□□ -0.19
CHMP2B-201ENST00000263780 RPN1P04843 607 aaKnown RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 ARID4AP29374 1257 aaPredicted RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 MAP2K2P36507 400 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 ATP2C1P98194 919 aaPredicted RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 NNTQ13423 1086 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 TTC38Q5R3I4 469 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 CNPY4Q8N129 248 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 MYO5AQ9Y4I1 1855 aaKnown RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 XDHP47989 1333 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 TACC1O75410 805 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 TRAPPC10P48553 1259 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 CDK17Q00537 523 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 E2F4Q16254 413 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 RRP12Q5JTH9 1297 aaKnown RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 OTUD6BQ8N6M0 293 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 SECISBP2LQ93073 1101 aaKnown RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 PURBQ96QR8 312 aaKnown RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 CNNM1Q9NRU3 951 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 MEGF6O75095 1541 aa13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 PDS5AQ29RF7 1337 aaKnown RBP13.86□□□□□ -0.19
CHMP2B-201ENST00000263780 PRPF3O43395 683 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms