RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 KAZNQ674X7 775 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 GBP6Q6ZN66 633 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 CNGA4Q8IV77 575 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 SPICE1Q8N0Z3 855 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 MRPL11Q9Y3B7 192 aaKnown RBP16.4■□□□□ 0.22
CCDC6-201ENST00000263102 TTC41PQ6P2S7 1318 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 POLR2DO15514 142 aaKnown RBP16.4■□□□□ 0.22
CCDC6-201ENST00000263102 ZNF18P17022 549 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 INPP1P49441 399 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 NUCB1Q02818 461 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
CCDC6-201ENST00000263102 TYRO3Q06418 890 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 GPBP1Q86WP2 473 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 DDX27Q96GQ7 796 aaKnown RBP16.4■□□□□ 0.22
CCDC6-201ENST00000263102 SMCO2A6NFE2 343 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 DPYSL4O14531 572 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 ABCB4P21439 1286 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 KCNJ14Q9UNX9 436 aa16.4■□□□□ 0.22
CCDC6-201ENST00000263102 ANXA13P27216 316 aa16.39■□□□□ 0.22
CCDC6-201ENST00000263102 PAK1Q13153 545 aa16.39■□□□□ 0.22
CCDC6-201ENST00000263102 HP1BP3Q5SSJ5 553 aaPredicted RBP16.39■□□□□ 0.22
CCDC6-201ENST00000263102 FAM182BQ5T319 152 aa16.39■□□□□ 0.22
CCDC6-201ENST00000263102 RETREG2Q8NC44 543 aa16.39■□□□□ 0.22
CCDC6-201ENST00000263102 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.22
CCDC6-201ENST00000263102 PHKBQ93100 1093 aa16.39■□□□□ 0.22
CCDC6-201ENST00000263102 SNX25Q9H3E2 840 aa16.39■□□□□ 0.22
CCDC6-201ENST00000263102 CPSF3Q9UKF6 684 aaKnown RBP16.39■□□□□ 0.22
CCDC6-201ENST00000263102 KCNA6P17658 529 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 MCF2L2Q86YR7 1114 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 PLCB1Q9NQ66 1216 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 A6NJR5 290 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 KLHL30Q0D2K2 578 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 BBS5Q8N3I7 341 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 STAMQ92783 540 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 PGBD1Q96JS3 809 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 PPP1R12CQ9BZL4 782 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 DMP1Q13316 513 aaPredicted RBP16.39■□□□□ 0.21
CCDC6-201ENST00000263102 TFDP1Q14186 410 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 IQCB1Q15051 598 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 FASTKD5Q7L8L6 764 aaKnown RBP16.39■□□□□ 0.21
CCDC6-201ENST00000263102 FAM76AQ8TAV0 307 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 EYA1Q99502 592 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 LSM14BQ9BX40 385 aaKnown RBP16.39■□□□□ 0.21
CCDC6-201ENST00000263102 TEKT3Q9BXF9 490 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 TMEM232C9JQI7 657 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 NVLO15381 856 aaKnown RBP16.39■□□□□ 0.21
CCDC6-201ENST00000263102 IGHDP01880 384 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 GOLGA8HP0CJ92 632 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 HADHQ16836 314 aaKnown RBP16.39■□□□□ 0.21
CCDC6-201ENST00000263102 BAG1Q99933 345 aaPredicted RBP16.39■□□□□ 0.21
CCDC6-201ENST00000263102 TAB2Q9NYJ8 693 aa16.39■□□□□ 0.21
CCDC6-201ENST00000263102 PSMD2Q13200 908 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 MMTAG2Q9BU76 263 aaKnown RBP16.38■□□□□ 0.21
CCDC6-201ENST00000263102 VCXQ9H320 206 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 ZNF532Q9HCE3 1301 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 FLT4P35916 1363 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 POLR2BP30876 1174 aaKnown RBP16.38■□□□□ 0.21
CCDC6-201ENST00000263102 BCAMP50895 628 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 ICA1Q05084 483 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 PNMA8AQ86V59 439 aaPredicted RBP16.38■□□□□ 0.21
CCDC6-201ENST00000263102 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
CCDC6-201ENST00000263102 PPP1R2P41236 205 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 SLC9C1Q4G0N8 1177 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 ANKRD42Q8N9B4 389 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 LPIN2Q92539 896 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 ORAI2Q96SN7 254 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 PIDD1Q9HB75 910 aa16.38■□□□□ 0.21
CCDC6-201ENST00000263102 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 CACNA2D3Q8IZS8 1091 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 WHAMMQ8TF30 809 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 CNKSR1Q969H4 720 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 PSTPIP2Q9H939 334 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 C1orf112Q9NSG2 853 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 NBPF11Q86T75 865 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 BTDP43251 543 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 NOP14P78316 857 aaKnown RBP16.37■□□□□ 0.21
CCDC6-201ENST00000263102 REXO1Q8N1G1 1221 aaKnown RBP16.37■□□□□ 0.21
CCDC6-201ENST00000263102 CMTR1Q8N1G2 835 aaKnown RBP16.37■□□□□ 0.21
CCDC6-201ENST00000263102 ELMOD1Q8N336 334 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 TMEM87BQ96K49 555 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCDC6-201ENST00000263102 SYNDIG1LA6NDD5 238 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 MGEA5O60502 916 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 VPS41P49754 854 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 LONRF2Q1L5Z9 754 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 SFMBT2Q5VUG0 894 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 CCDC127Q96BQ5 260 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 MAD1L1Q9Y6D9 718 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 EPHB1P54762 984 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 SLC10A4Q96EP9 437 aa16.37■□□□□ 0.21
CCDC6-201ENST00000263102 EFCC1Q9HA90 598 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms