RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 PHF20Q9BVI0 1012 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 ARHGEF10LQ9HCE6 1279 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 SCAF8Q9UPN6 1271 aaKnown RBP15.01□□□□□ -0.01
VAMP7-201ENST00000262640 LEO1Q8WVC0 666 aaPredicted RBP15.01□□□□□ -0.01
VAMP7-201ENST00000262640 PIBF1Q8WXW3 757 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 RRP36Q96EU6 259 aaKnown RBP15.01□□□□□ -0.01
VAMP7-201ENST00000262640 RIOX1Q9H6W3 641 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 BRMS1Q9HCU9 246 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 GGA3Q9NZ52 723 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 MYH6P13533 1939 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 FRMPD2Q68DX3 1309 aaPredicted RBP15.01□□□□□ -0.01
VAMP7-201ENST00000262640 PITPNM2Q9BZ72 1349 aa15.01□□□□□ -0.01
VAMP7-201ENST00000262640 HIRAP54198 1017 aaPredicted RBP15□□□□□ -0.01
VAMP7-201ENST00000262640 UBE2HP62256 183 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 CCDC96Q2M329 555 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 DCAF15Q66K64 600 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 SLFN13Q68D06 897 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 GINM1Q9NU53 330 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 MYH4Q9Y623 1939 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 ASNSP08243 561 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 NOSTRINQ8IVI9 506 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 SHISA4Q96DD7 197 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 GPCPD1Q9NPB8 672 aa15□□□□□ -0.01
VAMP7-201ENST00000262640 SEC63Q9UGP8 760 aaKnown RBP15□□□□□ -0.01
VAMP7-201ENST00000262640 PHF20L1A8MW92 1017 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 BTBD18B2RXH4 712 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 KRT2P35908 639 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 GPT2Q8TD30 523 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 GMCL1Q96IK5 515 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
VAMP7-201ENST00000262640 USP28Q96RU2 1077 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 MYH15Q9Y2K3 1946 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 GADD45BO75293 160 aaPredicted RBP14.99□□□□□ -0.01
VAMP7-201ENST00000262640 CALML3P27482 149 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 SLC1A4P43007 532 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 CCDC148Q8NFR7 591 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 UBA5Q9GZZ9 404 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 CPVLQ9H3G5 476 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 SH2D4AQ9H788 454 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 RTEL1Q9NZ71 1219 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 RCOR1Q9UKL0 485 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 TCHHQ07283 1943 aa14.99□□□□□ -0.01
VAMP7-201ENST00000262640 F5H6K3 240 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 NLRP5P59047 1200 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 KLRC3Q07444 240 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 NBPF12Q5TAG4 269 aaPredicted RBP14.98□□□□□ -0.01
VAMP7-201ENST00000262640 POLR3EQ9NVU0 708 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 BARHL2Q9NY43 387 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 TMX2Q9Y320 296 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 hCG_1984214I3L0E3 225 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 RAD21O60216 631 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 WWC2Q6AWC2 1192 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 KCTD1Q719H9 257 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 HEATR3Q7Z4Q2 680 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 ZNF713Q8N859 430 aaPredicted RBP14.98□□□□□ -0.01
VAMP7-201ENST00000262640 CCDC12Q8WUD4 166 aaPredicted RBP14.98□□□□□ -0.01
VAMP7-201ENST00000262640 GPKOWQ92917 476 aaPredicted RBP eCLIP14.98□□□□□ -0.01
VAMP7-201ENST00000262640 ZNF341Q9BYN7 854 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 GOPCQ9HD26 462 aa14.98□□□□□ -0.01
VAMP7-201ENST00000262640 A0A1W2PRG0 241 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 CTNND1O60716 968 aaKnown RBP14.97□□□□□ -0.01
VAMP7-201ENST00000262640 NDUFB10O96000 172 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 VEGFAP15692 232 aaPredicted RBP14.97□□□□□ -0.01
VAMP7-201ENST00000262640 CEBPZQ03701 1054 aaKnown RBP14.97□□□□□ -0.01
VAMP7-201ENST00000262640 GALNT17Q6IS24 598 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 OXER1Q8TDS5 423 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 PIGSQ96S52 555 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 VAT1LQ9HCJ6 419 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 STXBP3O00186 592 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 YEATS4O95619 227 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 NASPP49321 788 aaPredicted RBP14.97□□□□□ -0.01
VAMP7-201ENST00000262640 NR5A1Q13285 461 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 NPY5RQ15761 445 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 HOMER1Q86YM7 354 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 ADGRF4Q8IZF3 695 aa14.97□□□□□ -0.01
VAMP7-201ENST00000262640 FTOQ9C0B1 505 aaKnown RBP eCLIP14.97□□□□□ -0.01
VAMP7-201ENST00000262640 ISY1Q9ULR0 285 aaKnown RBP14.97□□□□□ -0.01
VAMP7-201ENST00000262640 ANO1Q5XXA6 986 aa14.96□□□□□ -0.01
VAMP7-201ENST00000262640 TTBK2Q6IQ55 1244 aa14.96□□□□□ -0.01
VAMP7-201ENST00000262640 ACER1Q8TDN7 264 aa14.96□□□□□ -0.01
VAMP7-201ENST00000262640 JMJD4Q9H9V9 463 aa14.96□□□□□ -0.01
VAMP7-201ENST00000262640 GOLGA6L4A6NEF3 574 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 ECE1P42892 770 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 SUPT20HL1Q3ZLR7 823 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 RILPL1Q5EBL4 403 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 DAGLBQ8NCG7 672 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 DCPSQ96C86 337 aaKnown RBP14.95□□□□□ -0.02
VAMP7-201ENST00000262640 ZNF112Q9UJU3 913 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 PCDHA4Q9UN74 947 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 CLIC4Q9Y696 253 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 GLTPD2A6NH11 291 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 BMP3P12645 472 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 STK38Q15208 465 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 USP50Q70EL3 339 aaPredicted RBP14.95□□□□□ -0.02
VAMP7-201ENST00000262640 LINC00301Q8NCQ3 95 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 KCNG4Q8TDN1 519 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 MTMR8Q96EF0 704 aa14.95□□□□□ -0.02
VAMP7-201ENST00000262640 SLC16A2P36021 539 aa14.94□□□□□ -0.02
VAMP7-201ENST00000262640 NAPAP54920 295 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms