RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 USP17L5A8MUK1 530 aa15.54■□□□□ 0.08
VMP1-201ENST00000262291 MCM7P33993 719 aa15.54■□□□□ 0.08
VMP1-201ENST00000262291 CRKP46108 304 aa15.54■□□□□ 0.08
VMP1-201ENST00000262291 METTL16Q86W50 562 aaKnown RBP15.54■□□□□ 0.08
VMP1-201ENST00000262291 CNNM3Q8NE01 707 aa15.54■□□□□ 0.08
VMP1-201ENST00000262291 TMEM51Q9NW97 253 aa15.54■□□□□ 0.08
VMP1-201ENST00000262291 TNS1Q9HBL0 1735 aaKnown RBP15.53■□□□□ 0.08
VMP1-201ENST00000262291 KLRF2D3W0D1 207 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 MPHOSPH10O00566 681 aaKnown RBP15.53■□□□□ 0.08
VMP1-201ENST00000262291 RAD21O60216 631 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 PTPREP23469 700 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 WWC2Q6AWC2 1192 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 FOXP4Q8IVH2 680 aaPredicted RBP15.53■□□□□ 0.08
VMP1-201ENST00000262291 NEDD1Q8NHV4 660 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 TNFRSF25Q93038 417 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 BRMS1Q9HCU9 246 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 SERTAD1Q9UHV2 236 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 PTGS1P23219 599 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 CEP57L1Q8IYX8 460 aa15.53■□□□□ 0.08
VMP1-201ENST00000262291 GTPBP4Q9BZE4 634 aaKnown RBP15.53■□□□□ 0.08
VMP1-201ENST00000262291 CGNQ9P2M7 1197 aaKnown RBP15.53■□□□□ 0.08
VMP1-201ENST00000262291 CASP1P29466 404 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 ZNF75DP51815 510 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 TTC38Q5R3I4 469 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 PLCD3Q8N3E9 789 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 VWA3AA6NCI4 1184 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 KIF20AO95235 890 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 RGS22Q8NE09 1264 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 ANKS1AQ92625 1134 aa15.52■□□□□ 0.08
VMP1-201ENST00000262291 SCN9AQ15858 1988 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 A0A087X0B3 334 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 PTGDRQ13258 359 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 KRBA2Q6ZNG9 492 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 DHX58Q96C10 678 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 ZNF287Q9HBT7 754 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 GPCPD1Q9NPB8 672 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 TCP11L1Q9NUJ3 509 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 CLIP2Q9UDT6 1046 aa15.52■□□□□ 0.07
VMP1-201ENST00000262291 PALM3A6NDB9 673 aaPredicted RBP15.51■□□□□ 0.07
VMP1-201ENST00000262291 CDC25AP30304 524 aa15.51■□□□□ 0.07
VMP1-201ENST00000262291 ZSCAN29Q8IWY8 852 aaPredicted RBP15.51■□□□□ 0.07
VMP1-201ENST00000262291 STAMQ92783 540 aa15.51■□□□□ 0.07
VMP1-201ENST00000262291 PARP1P09874 1014 aaKnown RBP15.51■□□□□ 0.07
VMP1-201ENST00000262291 HSP90AA4PQ58FG1 418 aa15.51■□□□□ 0.07
VMP1-201ENST00000262291 STYK1Q6J9G0 422 aa15.51■□□□□ 0.07
VMP1-201ENST00000262291 OSBPL5Q9H0X9 879 aaPredicted RBP15.51■□□□□ 0.07
VMP1-201ENST00000262291 KCNF1Q9H3M0 494 aa15.51■□□□□ 0.07
VMP1-201ENST00000262291 PCDHA5Q9Y5H7 936 aa15.51■□□□□ 0.07
VMP1-201ENST00000262291 SRPRBQ9Y5M8 271 aaKnown RBP15.51■□□□□ 0.07
VMP1-201ENST00000262291 DACT2Q5SW24 774 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 CCDC186Q7Z3E2 898 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 BLIDQ8IZY5 108 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 SERPINB13Q9UIV8 391 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
VMP1-201ENST00000262291 AFMP43652 599 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 NLRP12P59046 1061 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 LRMPQ12912 555 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 PODNQ7Z5L7 613 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 CERS3Q8IU89 383 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 SYMPKQ92797 1274 aaKnown RBP15.5■□□□□ 0.07
VMP1-201ENST00000262291 PIGSQ96S52 555 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 CEP131Q9UPN4 1083 aa15.5■□□□□ 0.07
VMP1-201ENST00000262291 DDTLA6NHG4 134 aaPredicted RBP15.49■□□□□ 0.07
VMP1-201ENST00000262291 PPIP5K2O43314 1243 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 SHMT1P34896 483 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 GABPAQ06546 454 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 ARID5BQ14865 1188 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 PTPN21Q16825 1174 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 TDRD3Q9H7E2 651 aaKnown RBP15.49■□□□□ 0.07
VMP1-201ENST00000262291 PYCARDQ9ULZ3 195 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 STXBP3O00186 592 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 TOP1P11387 765 aaKnown RBP15.49■□□□□ 0.07
VMP1-201ENST00000262291 IL17AQ16552 155 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 INF2Q27J81 1249 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 PLA2G4DQ86XP0 818 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 CNKSR1Q969H4 720 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 MTMR4Q9NYA4 1195 aa15.49■□□□□ 0.07
VMP1-201ENST00000262291 YDJCA8MPS7 323 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 CCDC144BQ3MJ40 725 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 TTBK2Q6IQ55 1244 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 C7orf43Q8WVR3 580 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 RAD17O75943 681 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 BMP6P22004 513 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 LMOD1P29536 600 aaPredicted RBP15.48■□□□□ 0.07
VMP1-201ENST00000262291 SLC16A2P36021 539 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 GNAQP50148 359 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 NAPAP54920 295 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 CCDC178Q5BJE1 867 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 DNAJC18Q9H819 358 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 PCDHA4Q9UN74 947 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 SUGT1Q9Y2Z0 365 aa15.48■□□□□ 0.07
VMP1-201ENST00000262291 FAM237AA0A1B0GTK4 181 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 HHIPL2Q6UWX4 724 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 COA7Q96BR5 231 aa15.47■□□□□ 0.07
VMP1-201ENST00000262291 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
VMP1-201ENST00000262291 ZNF277Q9NRM2 450 aaPredicted RBP15.47■□□□□ 0.07
VMP1-201ENST00000262291 PCDHA6Q9UN73 950 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms