RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 PLSCR1O15162 318 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 NMT2O60551 498 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 FAM47AQ5JRC9 791 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 SPATA1Q5VX52 437 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 PIK3AP1Q6ZUJ8 805 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 SUGCTQ9HAC7 445 aa16.39■□□□□ 0.21
SFSWAP-201ENST00000261674 BAG6P46379 1132 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 LMAN1P49257 510 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 FXR1P51114 621 aaKnown RBP eCLIP16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 EVX2Q03828 476 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 ADGRG1Q9Y653 693 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 STK36Q9NRP7 1315 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 NLRP5P59047 1200 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 RPS8P62241 208 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 SKIDA1Q1XH10 827 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 CAMKK2Q96RR4 588 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 MYO5AQ9Y4I1 1855 aaKnown RBP16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 RIMBP2O15034 1052 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 FGFR2P21802 821 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 LONRF2Q1L5Z9 754 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 IQCA1Q86XH1 822 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 SLC35F6Q8N357 371 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 ENAHQ8N8S7 591 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 ZNF512BQ96KM6 892 aaPredicted RBP16.38■□□□□ 0.21
SFSWAP-201ENST00000261674 TAF1P21675 1872 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 A0A1B0GTH6 734 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 R3HDM1Q15032 1099 aaKnown RBP16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 SHISA4Q96DD7 197 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 CALCOCO1Q9P1Z2 691 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 TTC38Q5R3I4 469 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 TAF3Q5VWG9 929 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 GUCA1BQ9UMX6 200 aa16.37■□□□□ 0.21
SFSWAP-201ENST00000261674 MYO1BO43795 1136 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 GNAT2P19087 354 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 ERCC5P28715 1186 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 CYP2C19P33261 490 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 TRIML1Q8N9V2 468 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 NUP98P52948 1817 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 USP17L12C9JPN9 530 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 USP17L21D6R901 530 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 DPYDQ12882 1025 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 RABGGTAQ92696 567 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 TXLNAP40222 546 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 GPS2Q13227 327 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 GPIHBP1Q8IV16 184 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 ZSCAN10Q96SZ4 725 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 ADD3Q9UEY8 706 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 TFR2Q9UP52 801 aa16.36■□□□□ 0.21
SFSWAP-201ENST00000261674 CTAGE9A4FU28 777 aa16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 KRT9P35527 623 aa16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 CUL4BQ13620 913 aa16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 RASGRP4Q8TDF6 673 aa16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 POLRMTO00411 1230 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 NT5DC1Q5TFE4 455 aa16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 AATFQ9NY61 560 aaKnown RBP eCLIP16.35■□□□□ 0.21
SFSWAP-201ENST00000261674 RNF225M0QZC1 329 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 PKN1Q16512 942 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 SRGAP1Q7Z6B7 1085 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 CTCFLQ8NI51 663 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 CCDC102AQ96A19 550 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 PDE11AQ9HCR9 933 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 VPS18Q9P253 973 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 ENC1O14682 589 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 MFAP3LO75121 409 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 GYPCP04921 128 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 UBXN1Q04323 297 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 KRT31Q15323 416 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 COL4A1P02462 1669 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 IQUBQ8NA54 791 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 GDAP1L1Q96MZ0 367 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 PANX2Q96RD6 677 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 FUT8Q9BYC5 575 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 TRIM10Q9UDY6 481 aa16.34■□□□□ 0.21
SFSWAP-201ENST00000261674 PPP1R3GB7ZBB8 358 aa16.33■□□□□ 0.21
SFSWAP-201ENST00000261674 PCMTD1Q96MG8 357 aaPredicted RBP16.33■□□□□ 0.21
SFSWAP-201ENST00000261674 CTAGE1Q96RT6 745 aa16.33■□□□□ 0.21
SFSWAP-201ENST00000261674 CDC23Q9UJX2 597 aa16.33■□□□□ 0.21
SFSWAP-201ENST00000261674 CNGA4Q8IV77 575 aa16.33■□□□□ 0.2
SFSWAP-201ENST00000261674 CHP1Q99653 195 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms