RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 MED4Q9NPJ6 270 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 KRT2P35908 639 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 RASGRF1Q13972 1273 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 KIF6Q6ZMV9 814 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 SPATA5Q8NB90 893 aa17.9■□□□□ 0.46
LMNB1-201ENST00000261366 PCMTD1Q96MG8 357 aaPredicted RBP17.9■□□□□ 0.46
LMNB1-201ENST00000261366 MKRN1Q9UHC7 482 aaKnown RBP17.9■□□□□ 0.46
LMNB1-201ENST00000261366 XIRP1Q702N8 1843 aaKnown RBP17.9■□□□□ 0.46
LMNB1-201ENST00000261366 PDE8BO95263 885 aa17.89■□□□□ 0.46
LMNB1-201ENST00000261366 DNAJC10Q8IXB1 793 aa17.89■□□□□ 0.46
LMNB1-201ENST00000261366 JAKMIP2Q96AA8 810 aa17.89■□□□□ 0.46
LMNB1-201ENST00000261366 BTG4Q9NY30 223 aa17.89■□□□□ 0.46
LMNB1-201ENST00000261366 TNKSO95271 1327 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 KLK7P49862 253 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 MAP3K12Q12852 859 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
LMNB1-201ENST00000261366 PIK3AP1Q6ZUJ8 805 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 ZBTB38Q8NAP3 1195 aaPredicted RBP17.89■□□□□ 0.45
LMNB1-201ENST00000261366 SMCR8Q8TEV9 937 aaPredicted RBP17.89■□□□□ 0.45
LMNB1-201ENST00000261366 CCDC51Q96ER9 411 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 MTRQ99707 1265 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 LACRTQ9GZZ8 138 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 TRMT112Q9UI30 125 aaKnown RBP17.89■□□□□ 0.45
LMNB1-201ENST00000261366 ADAMTS3O15072 1205 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 PCCAP05165 728 aaPredicted RBP17.89■□□□□ 0.45
LMNB1-201ENST00000261366 CORO7P57737 925 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 SLC4A8Q2Y0W8 1093 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 TRAPPC11Q7Z392 1133 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 SMARCAL1Q9NZC9 954 aa17.89■□□□□ 0.45
LMNB1-201ENST00000261366 LUC7L2Q9Y383 392 aaKnown RBP17.89■□□□□ 0.45
LMNB1-201ENST00000261366 CCDC196A0A1B0GTZ2 297 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 RCCD1A6NED2 376 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 PDE2AO00408 941 aaPredicted RBP17.88■□□□□ 0.45
LMNB1-201ENST00000261366 IRS4O14654 1257 aaPredicted RBP17.88■□□□□ 0.45
LMNB1-201ENST00000261366 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 PRCPP42785 496 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 HERVK_113P62684 666 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
LMNB1-201ENST00000261366 TSR1Q2NL82 804 aaKnown RBP17.88■□□□□ 0.45
LMNB1-201ENST00000261366 TTC38Q5R3I4 469 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 SH3RF1Q7Z6J0 888 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 KAT14Q9H8E8 782 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 ABCF2Q9UG63 623 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 ECM29Q5VYK3 1845 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 PMS1P54277 932 aaKnown RBP17.88■□□□□ 0.45
LMNB1-201ENST00000261366 TUBB2AQ13885 445 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 TUBB2BQ9BVA1 445 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 SELENOOQ9BVL4 669 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 AGPAT5Q9NUQ2 364 aa17.88■□□□□ 0.45
LMNB1-201ENST00000261366 PRPF6O94906 941 aaKnown RBP17.87■□□□□ 0.45
LMNB1-201ENST00000261366 CSF1RP07333 972 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 VEGFAP15692 232 aaPredicted RBP17.87■□□□□ 0.45
LMNB1-201ENST00000261366 XBP1P17861 261 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 ERCC3P19447 782 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 SLC7A5Q01650 507 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 WDR93Q6P2C0 686 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 COG1Q8WTW3 980 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 HDAC7Q8WUI4 952 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 PPM1EQ8WY54 764 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 RRP36Q96EU6 259 aaKnown RBP17.87■□□□□ 0.45
LMNB1-201ENST00000261366 NACAP1Q9BZK3 213 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 TMOD3Q9NYL9 352 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 LRP2BPQ9P2M1 347 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 SAMM50Q9Y512 469 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 BCAMP50895 628 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 PKN1Q16512 942 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 OR8K1Q8NGG5 319 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 LIMA1Q9UHB6 759 aaKnown RBP17.87■□□□□ 0.45
LMNB1-201ENST00000261366 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
LMNB1-201ENST00000261366 GOLGA6CA6NDK9 693 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 PARP1P09874 1014 aaKnown RBP17.86■□□□□ 0.45
LMNB1-201ENST00000261366 GOLGA6DP0CG33 693 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 IDEP14735 1019 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
LMNB1-201ENST00000261366 CTSWP56202 376 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 SND1Q7KZF4 910 aaKnown RBP eCLIP17.86■□□□□ 0.451e-7■■■□□ 15.1
LMNB1-201ENST00000261366 GPATCH11Q8N954 259 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 GOLGA6AQ9NYA3 693 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 MTMR7Q9Y216 660 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 PP2D1A8MPX8 630 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 B4DLN1 442 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 CXCR5P32302 372 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 DNA2P51530 1060 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 MAP9Q49MG5 647 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 EHD2Q9NZN4 543 aa17.86■□□□□ 0.45
LMNB1-201ENST00000261366 MAP3K15Q6ZN16 1313 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 CDHR2Q9BYE9 1310 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 RPS6KA5O75582 802 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 TRIM21P19474 475 aaKnown RBP17.85■□□□□ 0.45
LMNB1-201ENST00000261366 KRT26Q7Z3Y9 468 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 FAM76AQ8TAV0 307 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 TJP1Q07157 1748 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 PKD1L3Q7Z443 1732 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 ITIH6Q6UXX5 1313 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 GOLGA6BA6NDN3 693 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 VGLL2Q8N8G2 317 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 TRIM47Q96LD4 638 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 MYO1AQ9UBC5 1043 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms