RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 LIMCH1Q9UPQ0 1083 aa24.19■■□□□ 1.46
RTCA-201ENST00000260563 CCDC69A6NI79 296 aa24.18■■□□□ 1.46
RTCA-201ENST00000260563 FAM43AQ8N2R8 423 aa24.18■■□□□ 1.46
RTCA-201ENST00000260563 LARP6Q9BRS8 491 aaKnown RBP24.18■■□□□ 1.46
RTCA-201ENST00000260563 RPAP3Q9H6T3 665 aaPredicted RBP24.18■■□□□ 1.46
RTCA-201ENST00000260563 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
RTCA-201ENST00000260563 PCNTO95613 3336 aa24.18■■□□□ 1.46
RTCA-201ENST00000260563 SLC1A4P43007 532 aa24.17■■□□□ 1.46
RTCA-201ENST00000260563 FAM83BQ5T0W9 1011 aa24.17■■□□□ 1.46
RTCA-201ENST00000260563 DCAF4Q8WV16 495 aa24.17■■□□□ 1.46
RTCA-201ENST00000260563 GMCL1Q96IK5 515 aa24.17■■□□□ 1.46
RTCA-201ENST00000260563 TANGO6Q9C0B7 1094 aa24.17■■□□□ 1.46
RTCA-201ENST00000260563 ZCCHC17Q9NP64 241 aaKnown RBP24.17■■□□□ 1.46
RTCA-201ENST00000260563 ISY1Q9ULR0 285 aaKnown RBP24.17■■□□□ 1.46
RTCA-201ENST00000260563 SLC45A1Q9Y2W3 748 aa24.17■■□□□ 1.46
RTCA-201ENST00000260563 COL11A1P12107 1806 aaPredicted RBP24.16■■□□□ 1.46
RTCA-201ENST00000260563 PDHXO00330 501 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 RASGRP2Q7LDG7 609 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 CATIPQ7Z7H3 387 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 SGMS1Q86VZ5 419 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 TMX3Q96JJ7 454 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 PNMA3Q9UL41 463 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 TPCN1Q9ULQ1 816 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 A0A0G2JMZ2 1700 aa24.16■■□□□ 1.46
RTCA-201ENST00000260563 USP17L15C9J2P7 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L13C9JLJ4 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L11C9JVI0 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L18D6R9N7 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L22D6RA61 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L17D6RBQ6 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L19D6RCP7 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L20D6RJB6 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 PDHBP11177 359 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 HOXA7P31268 230 aaPredicted RBP24.15■■□□□ 1.46
RTCA-201ENST00000260563 SLC4A3P48751 1232 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 USP17L24Q0WX57 530 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 CCDC96Q2M329 555 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 ZNF654Q8IZM8 581 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 CHMP4CQ96CF2 233 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 NUP88Q99567 741 aaPredicted RBP24.15■■□□□ 1.46
RTCA-201ENST00000260563 ALDH1A1P00352 501 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 BMP3P12645 472 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 OSBPP22059 807 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 IRX3P78415 501 aaPredicted RBP24.15■■□□□ 1.46
RTCA-201ENST00000260563 ZSCAN31Q96LW9 406 aaPredicted RBP24.15■■□□□ 1.46
RTCA-201ENST00000260563 SLC12A7Q9Y666 1083 aa24.15■■□□□ 1.46
RTCA-201ENST00000260563 DDAH1O94760 285 aa24.14■■□□□ 1.45
RTCA-201ENST00000260563 SNHG28P0DPA3 235 aa24.14■■□□□ 1.45
RTCA-201ENST00000260563 MAP2K1Q02750 393 aaPredicted RBP24.14■■□□□ 1.45
RTCA-201ENST00000260563 APOBRQ0VD83 1088 aa24.14■■□□□ 1.45
RTCA-201ENST00000260563 CATSPERGQ6ZRH7 1159 aa24.14■■□□□ 1.45
RTCA-201ENST00000260563 PARK7Q99497 189 aaKnown RBP24.14■■□□□ 1.45
RTCA-201ENST00000260563 MYH6P13533 1939 aa24.13■■□□□ 1.45
RTCA-201ENST00000260563 EVCP57679 992 aa24.13■■□□□ 1.45
RTCA-201ENST00000260563 TAF1CQ15572 869 aaPredicted RBP24.13■■□□□ 1.45
RTCA-201ENST00000260563 SYNE3Q6ZMZ3 975 aa24.13■■□□□ 1.45
RTCA-201ENST00000260563 KCTD1Q719H9 257 aa24.13■■□□□ 1.45
RTCA-201ENST00000260563 SH2B1Q9NRF2 756 aaPredicted RBP24.13■■□□□ 1.45
RTCA-201ENST00000260563 FLOT1O75955 427 aa24.12■■□□□ 1.45
RTCA-201ENST00000260563 TROAPQ12815 778 aa24.12■■□□□ 1.45
RTCA-201ENST00000260563 ME3Q16798 604 aa24.12■■□□□ 1.45
RTCA-201ENST00000260563 NUP133Q8WUM0 1156 aa24.12■■□□□ 1.45
RTCA-201ENST00000260563 MYL10Q9BUA6 226 aa24.12■■□□□ 1.45
RTCA-201ENST00000260563 ASCC2Q9H1I8 757 aaPredicted RBP24.12■■□□□ 1.45
RTCA-201ENST00000260563 FRMPD2Q68DX3 1309 aaPredicted RBP24.12■■□□□ 1.45
RTCA-201ENST00000260563 KLF18A0A0U1RQI7 1052 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 LARGE1O95461 756 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 PARP1P09874 1014 aaKnown RBP24.11■■□□□ 1.45
RTCA-201ENST00000260563 CALM1P0DP23 149 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 CALM2P0DP24 149 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 CALM3P0DP25 149 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 STAT2P52630 851 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 ASPRV1Q53RT3 343 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 GPATCH4Q5T3I0 446 aaKnown RBP24.11■■□□□ 1.45
RTCA-201ENST00000260563 APOA5Q6Q788 366 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 MICU3Q86XE3 530 aa24.11■■□□□ 1.45
RTCA-201ENST00000260563 NAP1L2Q9ULW6 460 aaPredicted RBP24.11■■□□□ 1.45
RTCA-201ENST00000260563 TMEM232C9JQI7 657 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 CYP2C8P10632 490 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 ZNF543Q08ER8 600 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 IKQ13123 557 aaPredicted RBP24.1■■□□□ 1.45
RTCA-201ENST00000260563 SMCR8Q8TEV9 937 aaPredicted RBP24.1■■□□□ 1.45
RTCA-201ENST00000260563 ZNF274Q96GC6 653 aaPredicted RBP24.1■■□□□ 1.45
RTCA-201ENST00000260563 BEGAINQ9BUH8 593 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 FEM1BQ9UK73 627 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 BRPF3Q9ULD4 1205 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 GRM4Q14833 912 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 CTCFLQ8NI51 663 aaPredicted RBP24.1■■□□□ 1.45
RTCA-201ENST00000260563 MAP3K14Q99558 947 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 SLF1Q9BQI6 1058 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 ZFYVE28Q9HCC9 887 aa24.1■■□□□ 1.45
RTCA-201ENST00000260563 MYPNQ86TC9 1320 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 GOLGA8BA8MQT2 603 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 ZBTB43O43298 467 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 CA12O43570 354 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 RXRAP19793 462 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 CUL4AQ13619 759 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 COG2Q14746 738 aa24.09■■□□□ 1.45
RTCA-201ENST00000260563 SAMD1Q6SPF0 538 aaPredicted RBP24.09■■□□□ 1.45
RTCA-201ENST00000260563 FAM160B2Q86V87 743 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms