RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ANP32AP39687 249 aaKnown RBP18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 SLC1A4P43007 532 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 RTN1Q16799 776 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 PRRT2Q7Z6L0 340 aaPredicted RBP18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 STAG2Q8N3U4 1231 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 DCAF4Q8WV16 495 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 LPAR1Q92633 364 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 GTF3C6Q969F1 213 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 CREBZFQ9NS37 354 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 ZBTB48P10074 688 aaPredicted RBP18.43■□□□□ 0.54
CCDC90B-201ENST00000260054 VCAM1P19320 739 aa18.43■□□□□ 0.54
CCDC90B-201ENST00000260054 ADD1P35611 737 aaKnown RBP18.43■□□□□ 0.54
CCDC90B-201ENST00000260054 ZNF543Q08ER8 600 aa18.43■□□□□ 0.54
CCDC90B-201ENST00000260054 KCTD1Q719H9 257 aa18.43■□□□□ 0.54
CCDC90B-201ENST00000260054 CTCFLQ8NI51 663 aaPredicted RBP18.43■□□□□ 0.54
CCDC90B-201ENST00000260054 HHIPL1Q96JK4 782 aa18.43■□□□□ 0.54
CCDC90B-201ENST00000260054 PALM3A6NDB9 673 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-201ENST00000260054 SLC10A3P09131 477 aa18.42■□□□□ 0.54
CCDC90B-201ENST00000260054 PARP1P09874 1014 aaKnown RBP18.42■□□□□ 0.54
CCDC90B-201ENST00000260054 CCDC96Q2M329 555 aa18.42■□□□□ 0.54
CCDC90B-201ENST00000260054 FAM83BQ5T0W9 1011 aa18.42■□□□□ 0.54
CCDC90B-201ENST00000260054 CCDC83Q8IWF9 413 aa18.42■□□□□ 0.54
CCDC90B-201ENST00000260054 MS4A4AQ96JQ5 239 aa18.42■□□□□ 0.54
CCDC90B-201ENST00000260054 PLEKHA8P1O95397 391 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 BMP3P12645 472 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 KIF5BP33176 963 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 SNAPC2Q13487 334 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 MOGSQ13724 837 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 ASPRV1Q53RT3 343 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 TMOD4Q9NZQ9 345 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 FAM155AB1AL88 458 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 DTNBO60941 627 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 PPP2R5BQ15173 497 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 TTBK2Q6IQ55 1244 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 TMTC3Q6ZXV5 915 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 NBPF11Q86T75 865 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 CMTR1Q8N1G2 835 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 RBM28Q9NW13 759 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-201ENST00000260054 LOC285556D6RIA3 1793 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 KLRF2D3W0D1 207 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 GTF2A2P52657 109 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 CUL4AQ13619 759 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 NTRK3Q16288 839 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 SLC35G1Q2M3R5 365 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 TREML2Q5T2D2 321 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 GADL1Q6ZQY3 521 aa18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 SRBD1Q8N5C6 995 aaKnown RBP18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 PROCA1Q8NCQ7 364 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 RPAP3Q9H6T3 665 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-201ENST00000260054 CCDC196A0A1B0GTZ2 297 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 RASSF10A6NK89 507 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 TMEM232C9JQI7 657 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 CTDNEP1O95476 244 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 BECN1Q14457 450 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 CYP4F22Q6NT55 531 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 CCDC82Q8N4S0 544 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 CCDC102AQ96A19 550 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
CCDC90B-201ENST00000260054 PPFIA3O75145 1194 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 CETPP11597 493 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 SLC16A2P36021 539 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 HTRA3P83110 453 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 FUT2Q10981 343 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 PAXIP1Q6ZW49 1069 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 FASTKD5Q7L8L6 764 aaKnown RBP18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 BRI3BPQ8WY22 251 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 FBXO28Q9NVF7 368 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 CCL15-CCL14A0A0B4J2E2 113 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 CPLX1O14810 134 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 CYTH3O43739 400 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 DHX16O60231 1041 aaKnown RBP18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 GNAQP50148 359 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 CCL15Q16663 113 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 DEFB115Q30KQ5 88 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 GPAT2Q6NUI2 795 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 AGTPBP1Q9UPW5 1226 aa18.38■□□□□ 0.53
CCDC90B-201ENST00000260054 IFNAR1P17181 557 aa18.37■□□□□ 0.53
CCDC90B-201ENST00000260054 SLC4A3P48751 1232 aa18.37■□□□□ 0.53
CCDC90B-201ENST00000260054 STAT2P52630 851 aa18.37■□□□□ 0.53
CCDC90B-201ENST00000260054 GRM1Q13255 1194 aa18.37■□□□□ 0.53
CCDC90B-201ENST00000260054 BTNL9Q6UXG8 535 aa18.37■□□□□ 0.53
CCDC90B-201ENST00000260054 PHKBQ93100 1093 aa18.37■□□□□ 0.53
CCDC90B-201ENST00000260054 CNTNAP5Q8WYK1 1306 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 JAK2O60674 1132 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 PLA2G6O60733 806 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 IKQ13123 557 aaPredicted RBP18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 CATSPERGQ6ZRH7 1159 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 NSUN7Q8NE18 718 aaKnown RBP18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 ZIC5Q96T25 663 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 LZTS2Q9BRK4 669 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 SPZ1Q9BXG8 430 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
CCDC90B-201ENST00000260054 TESPA1A2RU30 521 aaPredicted RBP18.35■□□□□ 0.53
CCDC90B-201ENST00000260054 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms