RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SLFN13Q68D06 897 aa20.57■□□□□ 0.88
CCDC115-201ENST00000259229 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
CCDC115-201ENST00000259229 PNMA8AQ86V59 439 aaPredicted RBP20.57■□□□□ 0.88
CCDC115-201ENST00000259229 DCAF4Q8WV16 495 aa20.57■□□□□ 0.88
CCDC115-201ENST00000259229 GMCL1Q96IK5 515 aa20.57■□□□□ 0.88
CCDC115-201ENST00000259229 WRNIP1Q96S55 665 aa20.57■□□□□ 0.88
CCDC115-201ENST00000259229 ARHGEF10LQ9HCE6 1279 aa20.57■□□□□ 0.88
CCDC115-201ENST00000259229 TCHHQ07283 1943 aa20.57■□□□□ 0.88
CCDC115-201ENST00000259229 H3BQV1 296 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 SMARCA1P28370 1054 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 IFFO2Q5TF58 517 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 KRT40Q6A162 431 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 SCYL3Q8IZE3 742 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.56■□□□□ 0.88
CCDC115-201ENST00000259229 WASF1Q92558 559 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 RIOX1Q9H6W3 641 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 USP2O75604 605 aaPredicted RBP20.56■□□□□ 0.88
CCDC115-201ENST00000259229 PFKFB3Q16875 520 aaPredicted RBP20.56■□□□□ 0.88
CCDC115-201ENST00000259229 TTBK2Q6IQ55 1244 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 KCTD1Q719H9 257 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 ZKSCAN4Q969J2 545 aaPredicted RBP20.56■□□□□ 0.88
CCDC115-201ENST00000259229 CDCA5Q96FF9 252 aa20.56■□□□□ 0.88
CCDC115-201ENST00000259229 NOL9Q5SY16 702 aaKnown RBP20.55■□□□□ 0.88
CCDC115-201ENST00000259229 GPATCH4Q5T3I0 446 aaKnown RBP20.55■□□□□ 0.88
CCDC115-201ENST00000259229 UBA5Q9GZZ9 404 aa20.55■□□□□ 0.88
CCDC115-201ENST00000259229 GPCPD1Q9NPB8 672 aa20.55■□□□□ 0.88
CCDC115-201ENST00000259229 KIF28PB7ZC32 967 aa20.54■□□□□ 0.88
CCDC115-201ENST00000259229 SCG2P13521 617 aa20.54■□□□□ 0.88
CCDC115-201ENST00000259229 CCDC96Q2M329 555 aa20.54■□□□□ 0.88
CCDC115-201ENST00000259229 NUP88Q99567 741 aaPredicted RBP20.54■□□□□ 0.88
CCDC115-201ENST00000259229 VCPKMTQ9H867 229 aa20.54■□□□□ 0.88
CCDC115-201ENST00000259229 SLC1A4P43007 532 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 AKAP17AQ02040 695 aaKnown RBP20.53■□□□□ 0.88
CCDC115-201ENST00000259229 FAM173BQ6P4H8 233 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 VPS54Q9P1Q0 977 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 RBM27Q9P2N5 1060 aaKnown RBP20.53■□□□□ 0.88
CCDC115-201ENST00000259229 PARP14Q460N5 1801 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 PTPRFP10586 1907 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 MMP1P03956 469 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 PTPRAP18433 802 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 MCM4P33991 863 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 KIF23Q02241 960 aaPredicted RBP20.53■□□□□ 0.88
CCDC115-201ENST00000259229 NPY5RQ15761 445 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.53■□□□□ 0.88
CCDC115-201ENST00000259229 MTMR8Q96EF0 704 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 GBP4Q96PP9 640 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 KCNJ14Q9UNX9 436 aa20.53■□□□□ 0.88
CCDC115-201ENST00000259229 SLC16A2P36021 539 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 PRKG1Q13976 671 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 FOXD4L6Q3SYB3 417 aaPredicted RBP20.52■□□□□ 0.88
CCDC115-201ENST00000259229 TYW1BQ6NUM6 668 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 FOXD4L3Q6VB84 417 aaPredicted RBP20.52■□□□□ 0.88
CCDC115-201ENST00000259229 SPICE1Q8N0Z3 855 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 PIGSQ96S52 555 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 PHF20Q9BVI0 1012 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 ZSCAN16Q9H4T2 348 aaPredicted RBP20.52■□□□□ 0.88
CCDC115-201ENST00000259229 SH2D4AQ9H788 454 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 JMJD4Q9H9V9 463 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 GOPCQ9HD26 462 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 SNCAIPQ9Y6H5 919 aa20.52■□□□□ 0.88
CCDC115-201ENST00000259229 BMP3P12645 472 aa20.51■□□□□ 0.87
CCDC115-201ENST00000259229 WWC2Q6AWC2 1192 aa20.51■□□□□ 0.87
CCDC115-201ENST00000259229 ADGRF4Q8IZF3 695 aa20.51■□□□□ 0.87
CCDC115-201ENST00000259229 WDR18Q9BV38 432 aa20.51■□□□□ 0.87
CCDC115-201ENST00000259229 KIAA1683Q9H0B3 1180 aa20.51■□□□□ 0.87
CCDC115-201ENST00000259229 RAD21O60216 631 aa20.5■□□□□ 0.87
CCDC115-201ENST00000259229 DNM1Q05193 864 aaKnown RBP20.5■□□□□ 0.87
CCDC115-201ENST00000259229 VGLL4Q14135 290 aa20.5■□□□□ 0.87
CCDC115-201ENST00000259229 ZYXQ15942 572 aaKnown RBP20.5■□□□□ 0.87
CCDC115-201ENST00000259229 MAP1SQ66K74 1059 aaPredicted RBP20.5■□□□□ 0.87
CCDC115-201ENST00000259229 BTNL9Q6UXG8 535 aa20.5■□□□□ 0.87
CCDC115-201ENST00000259229 GPKOWQ92917 476 aaPredicted RBP eCLIP20.5■□□□□ 0.87
CCDC115-201ENST00000259229 NMRK2Q9NPI5 230 aa20.5■□□□□ 0.87
CCDC115-201ENST00000259229 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 STXBP3O00186 592 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 U2AF2P26368 475 aaKnown RBP eCLIP20.49■□□□□ 0.87
CCDC115-201ENST00000259229 DGKZQ13574 1117 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 TRIM29Q14134 588 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 MAP3K11Q16584 847 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 MCTP1Q6DN14 999 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 HOMER1Q86YM7 354 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 RRP36Q96EU6 259 aaKnown RBP20.49■□□□□ 0.87
CCDC115-201ENST00000259229 ATP6V1DQ9Y5K8 247 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 USP17L10C9JJH3 530 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 PPP1R11O60927 126 aaPredicted RBP20.49■□□□□ 0.87
CCDC115-201ENST00000259229 FAM83BQ5T0W9 1011 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 VAT1LQ9HCJ6 419 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 SH3GLB2Q9NR46 395 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 PICK1Q9NRD5 415 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
CCDC115-201ENST00000259229 LOC285556D6RIA3 1793 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 ADAMTS3O15072 1205 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 PPP1R12BO60237 982 aaPredicted RBP20.48■□□□□ 0.87
CCDC115-201ENST00000259229 MAP3K9P80192 1104 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 FMR1Q06787 632 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCDC115-201ENST00000259229 MTMR2Q13614 643 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 MOB2Q70IA6 237 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms