RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
CSHL1-201ENST00000259003 BOLA2Q9H3K6 86 aa15.32■□□□□ 0.04
CSHL1-201ENST00000259003 SEMA6BQ9H3T3 888 aa15.32■□□□□ 0.04
CSHL1-201ENST00000259003 KBTBD13C9JR72 458 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 PGK1P00558 417 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 HNRNPUQ00839 825 aaKnown RBP eCLIP15.31■□□□□ 0.04
CSHL1-201ENST00000259003 TLE2Q04725 743 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 ICA1Q05084 483 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 ZNF697Q5TEC3 545 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 ARRDC4Q8NCT1 418 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 SHCBP1Q8NEM2 672 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 MYLIPQ8WY64 445 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 VCPKMTQ9H867 229 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 TMX2Q9Y320 296 aa15.31■□□□□ 0.04
CSHL1-201ENST00000259003 STRNO43815 780 aa15.3■□□□□ 0.04
CSHL1-201ENST00000259003 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
CSHL1-201ENST00000259003 ADD2P35612 726 aa15.3■□□□□ 0.04
CSHL1-201ENST00000259003 CDK8P49336 464 aa15.3■□□□□ 0.04
CSHL1-201ENST00000259003 ERC1Q8IUD2 1116 aa15.3■□□□□ 0.04
CSHL1-201ENST00000259003 PRKAG2Q9UGJ0 569 aa15.3■□□□□ 0.04
CSHL1-201ENST00000259003 USP17L12C9JPN9 530 aa15.29■□□□□ 0.04
CSHL1-201ENST00000259003 USP17L21D6R901 530 aa15.29■□□□□ 0.04
CSHL1-201ENST00000259003 TTF1Q15361 905 aaPredicted RBP15.29■□□□□ 0.04
CSHL1-201ENST00000259003 C12orf60Q5U649 245 aa15.29■□□□□ 0.04
CSHL1-201ENST00000259003 STK11IPQ8N1F8 1099 aa15.29■□□□□ 0.04
CSHL1-201ENST00000259003 REPS2Q8NFH8 660 aa15.29■□□□□ 0.04
CSHL1-201ENST00000259003 NUP88Q99567 741 aaPredicted RBP15.29■□□□□ 0.04
CSHL1-201ENST00000259003 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.29■□□□□ 0.04
CSHL1-201ENST00000259003 MROH8Q9H579 483 aa15.29■□□□□ 0.04
CSHL1-201ENST00000259003 ADAMTS5Q9UNA0 930 aa15.29■□□□□ 0.04
CSHL1-201ENST00000259003 NCOR1O75376 2440 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 FCER1AP12319 257 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 FAM83BQ5T0W9 1011 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.28■□□□□ 0.04
CSHL1-201ENST00000259003 MMP19Q99542 508 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 ARHGEF10LQ9HCE6 1279 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 XPNPEP3Q9NQH7 507 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 PAG1Q9NWQ8 432 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 PHF24Q9UPV7 400 aa15.28■□□□□ 0.04
CSHL1-201ENST00000259003 MYADML2A6NDP7 307 aa15.27■□□□□ 0.04
CSHL1-201ENST00000259003 WDR46O15213 610 aaKnown RBP15.27■□□□□ 0.04
CSHL1-201ENST00000259003 IFIT2P09913 472 aaKnown RBP15.27■□□□□ 0.04
CSHL1-201ENST00000259003 ZNF865P0CJ78 1059 aaPredicted RBP15.27■□□□□ 0.04
CSHL1-201ENST00000259003 ZNF792Q3KQV3 632 aa15.27■□□□□ 0.04
CSHL1-201ENST00000259003 C16orf86Q6ZW13 317 aa15.27■□□□□ 0.04
CSHL1-201ENST00000259003 ABRAQ8N0Z2 381 aa15.27■□□□□ 0.04
CSHL1-201ENST00000259003 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
CSHL1-201ENST00000259003 MB21D1Q8N884 522 aa15.27■□□□□ 0.04
CSHL1-201ENST00000259003 MAFAQ8NHW3 353 aaPredicted RBP15.27■□□□□ 0.04
CSHL1-201ENST00000259003 KIF1BPQ96EK5 621 aa15.27■□□□□ 0.04
CSHL1-201ENST00000259003 ZNF214Q9UL59 606 aaPredicted RBP15.27■□□□□ 0.04
CSHL1-201ENST00000259003 COG6Q9Y2V7 657 aa15.27■□□□□ 0.04
CSHL1-201ENST00000259003 TCF20Q9UGU0 1960 aaKnown RBP15.27■□□□□ 0.03
CSHL1-201ENST00000259003 LCTP09848 1927 aa15.27■□□□□ 0.03
CSHL1-201ENST00000259003 VWA5AO00534 786 aa15.26■□□□□ 0.03
CSHL1-201ENST00000259003 RAD21O60216 631 aa15.26■□□□□ 0.03
CSHL1-201ENST00000259003 SMARCA5O60264 1052 aaPredicted RBP15.26■□□□□ 0.03
CSHL1-201ENST00000259003 PQBP1O60828 265 aaKnown RBP15.26■□□□□ 0.03
CSHL1-201ENST00000259003 CTR9Q6PD62 1173 aa15.26■□□□□ 0.03
CSHL1-201ENST00000259003 RIOX2Q8IUF8 465 aa15.26■□□□□ 0.03
CSHL1-201ENST00000259003 TINF2Q9BSI4 451 aa15.26■□□□□ 0.03
CSHL1-201ENST00000259003 PUS7LQ9H0K6 701 aaKnown RBP15.26■□□□□ 0.03
CSHL1-201ENST00000259003 RIPK3Q9Y572 518 aa15.26■□□□□ 0.03
CSHL1-201ENST00000259003 ZBED9Q6R2W3 1325 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 A0A1W2PQ45 241 aaPredicted RBP15.25■□□□□ 0.03
CSHL1-201ENST00000259003 A0A1W2PQY0 241 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 ADCY6O43306 1168 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 ADAMTS4O75173 837 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 CLTBP09497 229 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 STAT3P40763 770 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 C1orf53Q5VUE5 145 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 TMED8Q6PL24 325 aaPredicted RBP15.25■□□□□ 0.03
CSHL1-201ENST00000259003 MIER1Q8N108 512 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 USP38Q8NB14 1042 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 ATP8A2Q9NTI2 1148 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 PPP1R9AQ9ULJ8 1098 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 SLC4A4Q9Y6R1 1079 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 CHD9Q3L8U1 2897 aa15.25■□□□□ 0.03
CSHL1-201ENST00000259003 REV3LO60673 3130 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 SLC25A27O95847 323 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 SNAI1O95863 264 aaPredicted RBP15.24■□□□□ 0.03
CSHL1-201ENST00000259003 RARBP10826 455 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 ATP5JP18859 108 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 SLC4A3P48751 1232 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 SMAD3P84022 425 aaKnown RBP15.24■□□□□ 0.03
CSHL1-201ENST00000259003 FAAP100Q0VG06 881 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 HSP90AB4PQ58FF6 505 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 HAUS7Q99871 368 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 ZBTB40Q9NUA8 1239 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 SLC5A4Q9NY91 659 aa15.24■□□□□ 0.03
CSHL1-201ENST00000259003 SCN5AQ14524 2016 aa15.23■□□□□ 0.03
CSHL1-201ENST00000259003 KIAA0355O15063 1070 aa15.23■□□□□ 0.03
CSHL1-201ENST00000259003 PTGS1P23219 599 aa15.23■□□□□ 0.03
CSHL1-201ENST00000259003 GRIN2CQ14957 1233 aa15.23■□□□□ 0.03
CSHL1-201ENST00000259003 RNPC3Q96LT9 517 aaKnown RBP15.23■□□□□ 0.03
CSHL1-201ENST00000259003 CCDC17Q96LX7 622 aa15.23■□□□□ 0.03
CSHL1-201ENST00000259003 FGD4Q96M96 766 aa15.23■□□□□ 0.03
CSHL1-201ENST00000259003 PRDM6Q9NQX0 595 aa15.23■□□□□ 0.03
CSHL1-201ENST00000259003 MUC3AQ02505 3323 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms