RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 LDHCP07864 332 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 CUL4BQ13620 913 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 SYT10Q6XYQ8 523 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 TMTC3Q6ZXV5 915 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 SGMS1Q86VZ5 419 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 PLEKHA4Q9H4M7 779 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 FLT1P17948 1338 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 H0YIN7 160 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 OFD1O75665 1012 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 YEATS4O95619 227 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 CMA1P23946 247 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 KIF5BP33176 963 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 CYP4A11Q02928 519 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 IQCB1Q15051 598 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 C12orf60Q5U649 245 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 TMTC2Q8N394 836 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 LARGE2Q8N3Y3 721 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
CKAP2-201ENST00000258607 LRP6O75581 1613 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 CNTNAP4Q9C0A0 1308 aa10.33□□□□□ -0.75
CKAP2-201ENST00000258607 POLRMTO00411 1230 aaKnown RBP10.33□□□□□ -0.76
CKAP2-201ENST00000258607 MEIS1O00470 390 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 TEX33O43247 280 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 CALM1P0DP23 149 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 CALM2P0DP24 149 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 CALM3P0DP25 149 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 RASA1P20936 1047 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 CBX1P83916 185 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 SEPT2Q15019 361 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 RILPL1Q5EBL4 403 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 RCSD1Q6JBY9 416 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 CDK5RAP3Q96JB5 506 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 USP17L10C9JJH3 530 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 TFRCP02786 760 aaKnown RBP10.33□□□□□ -0.76
CKAP2-201ENST00000258607 BMP6P22004 513 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 ARID5AQ03989 594 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 MTF1Q14872 753 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 PTPAQ15257 358 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 BLIDQ8IZY5 108 aa10.33□□□□□ -0.76
CKAP2-201ENST00000258607 ARPP21Q9UBL0 812 aaPredicted RBP10.33□□□□□ -0.76
CKAP2-201ENST00000258607 TDP2O95551 362 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 RXRBP28702 533 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 SF3B2Q13435 895 aaKnown RBP10.32□□□□□ -0.76
CKAP2-201ENST00000258607 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 ATP8A2Q9NTI2 1148 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 DNAI1Q9UI46 699 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 MAN1B1Q9UKM7 699 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 RTL9Q8NET4 1388 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 A0A0U1RQJ8 604 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 ASIC1P78348 528 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 TDRD7Q8NHU6 1098 aaKnown RBP10.32□□□□□ -0.76
CKAP2-201ENST00000258607 ATRIPQ8WXE1 791 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 PNPLA7Q6ZV29 1317 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 DDTLA6NHG4 134 aaPredicted RBP10.32□□□□□ -0.76
CKAP2-201ENST00000258607 URI1O94763 535 aaPredicted RBP10.32□□□□□ -0.76
CKAP2-201ENST00000258607 SLC1A4P43007 532 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 NELFCDQ8IXH7 590 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 TBCKQ8TEA7 893 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 SLC39A2Q9NP94 309 aa10.32□□□□□ -0.76
CKAP2-201ENST00000258607 KRT18P05783 430 aaKnown RBP10.31□□□□□ -0.76
CKAP2-201ENST00000258607 MYL5Q02045 173 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 PTPN14Q15678 1187 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 MAP3K14Q99558 947 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 RTFDC1Q9BY42 306 aaPredicted RBP10.31□□□□□ -0.76
CKAP2-201ENST00000258607 FBXO2Q9UK22 296 aaPredicted RBP10.31□□□□□ -0.76
CKAP2-201ENST00000258607 N4BP3O15049 544 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 CTAGE5O15320 804 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 CFBP00751 764 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 NLRP12P59046 1061 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 SLC35G1Q2M3R5 365 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 UVSSAQ2YD98 709 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 POTEDQ86YR6 584 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 TEKT1Q969V4 418 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 KIFC2Q96AC6 838 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 PSMB7Q99436 277 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 FEZ1Q99689 392 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 BRIP1Q9BX63 1249 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 LEMD3Q9Y2U8 911 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 PKD1L3Q7Z443 1732 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 CNTNAP5Q8WYK1 1306 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 CUTAO60888 179 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 GH2P01242 217 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 STAT3P40763 770 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 SKIDA1Q1XH10 827 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 DTHD1Q6ZMT9 781 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 RRP36Q96EU6 259 aaKnown RBP10.31□□□□□ -0.76
CKAP2-201ENST00000258607 CSRNP1Q96S65 589 aa10.31□□□□□ -0.76
CKAP2-201ENST00000258607 ECE2O60344 883 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
CKAP2-201ENST00000258607 ATP2B4P23634 1241 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 GSTO1P78417 241 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 ALX1Q15699 326 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 CDC42EP5Q6NZY7 148 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 LRRC8AQ8IWT6 810 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 RNF26Q9BY78 433 aaPredicted RBP10.3□□□□□ -0.76
CKAP2-201ENST00000258607 ALDH8A1Q9H2A2 487 aaPredicted RBP10.3□□□□□ -0.76
CKAP2-201ENST00000258607 SFI1A8K8P3 1242 aa10.3□□□□□ -0.76
CKAP2-201ENST00000258607 ZNF76P36508 570 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms