RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 DHX8Q14562 1220 aaKnown RBP18.8■□□□□ 0.6
UBQLN1-201ENST00000257468 GRM4Q14833 912 aa18.8■□□□□ 0.6
UBQLN1-201ENST00000257468 HOMER1Q86YM7 354 aa18.8■□□□□ 0.6
UBQLN1-201ENST00000257468 ROBO3Q96MS0 1386 aa18.8■□□□□ 0.6
UBQLN1-201ENST00000257468 TEX33O43247 280 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 BAG3O95817 575 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 BTDP43251 543 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 SPECC1LQ69YQ0 1117 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 TC2NQ8N9U0 490 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 LRRN4CLQ8ND94 238 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 CDK5RAP2Q96SN8 1893 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 PPP1R3GB7ZBB8 358 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 KIF2AO00139 706 aaPredicted RBP18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 FANCGO15287 622 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 RASA1P20936 1047 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 GSTO1P78417 241 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 SYCP1Q15431 976 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 WWC2Q6AWC2 1192 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 PDXDC2PQ6P474 469 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 APTXQ7Z2E3 356 aaKnown RBP18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 TMEM47Q9BQJ4 181 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 CD209Q9NNX6 404 aa18.79■□□□□ 0.6
UBQLN1-201ENST00000257468 SPDYE4A6NLX3 237 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 TRAPPC10P48553 1259 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 NR1I3Q14994 352 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 HEATR3Q7Z4Q2 680 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 REXO1L1PQ8IX06 675 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 ZNF444Q8N0Y2 327 aaPredicted RBP18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 C4orf32Q8N8J7 132 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 CCDC34Q96HJ3 373 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 PCDHA4Q9UN74 947 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 CTNND2Q9UQB3 1225 aa18.78■□□□□ 0.6
UBQLN1-201ENST00000257468 HSPA1LP34931 641 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 PPP4CP60510 307 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 GSDMAQ96QA5 445 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 A0A1B0GTH6 734 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 CBX1P83916 185 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 SPATA1Q5VX52 437 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 TMED8Q6PL24 325 aaPredicted RBP18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 AMOTL1Q8IY63 956 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 IQUBQ8NA54 791 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 ANKS1AQ92625 1134 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 BAG1Q99933 345 aaPredicted RBP18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 DNAI1Q9UI46 699 aa18.77■□□□□ 0.6
UBQLN1-201ENST00000257468 SNED1Q8TER0 1413 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 PP2D1A8MPX8 630 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 GYS1P13807 737 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 CALML3P27482 149 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 KARSQ15046 597 aaKnown RBP18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 TRIM65Q6PJ69 517 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 TOGARAM2Q6ZUX3 1019 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 FAM177A1Q8N128 213 aaPredicted RBP18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 DDX60LQ5H9U9 1706 aaKnown RBP18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 M0R2N6 131 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 SLU7O95391 586 aaKnown RBP18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 ELF2Q15723 593 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 INF2Q27J81 1249 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 TMEM60Q9H2L4 133 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 PCDHA6Q9UN73 950 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 PCDHA8Q9Y5H6 950 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 AFF2P51816 1311 aa18.76■□□□□ 0.59
UBQLN1-201ENST00000257468 ARHGAP6O43182 974 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 TEX11Q8IYF3 940 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 PPP2R2CQ9Y2T4 447 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 CCDC194A0A1B0GVG4 234 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 STXBP3O00186 592 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 ZBTB22O15209 634 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 SERPINB2P05120 415 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 LDHCP07864 332 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 CDK8P49336 464 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 ETF1P62495 437 aaKnown RBP18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 CDKAL1Q5VV42 579 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 RRAGBQ5VZM2 374 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 ERO1AQ96HE7 468 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 SH3GLB2Q9NR46 395 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 POLLQ9UGP5 575 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 GGA1Q9UJY5 639 aa18.75■□□□□ 0.59
UBQLN1-201ENST00000257468 CRY2Q49AN0 593 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 MFSD14BQ5SR56 506 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 MEX3CQ5U5Q3 659 aaKnown RBP18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 EYA3Q99504 573 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 DESI2Q9BSY9 194 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 L2HGDHQ9H9P8 463 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 TCP11L1Q9NUJ3 509 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 MAPK8IP1Q9UQF2 711 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 FLT1P17948 1338 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 PALM3A6NDB9 673 aaPredicted RBP18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 MTF1Q14872 753 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 C15orf52Q6ZUT6 534 aaKnown RBP18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 CPLX3Q8WVH0 158 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 PLIN2Q99541 437 aa18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 ADD3Q9UEY8 706 aaKnown RBP18.74■□□□□ 0.59
UBQLN1-201ENST00000257468 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
UBQLN1-201ENST00000257468 KLRF2D3W0D1 207 aa18.73■□□□□ 0.59
UBQLN1-201ENST00000257468 CCT6AP40227 531 aaKnown RBP18.73■□□□□ 0.59
UBQLN1-201ENST00000257468 USP17L2Q6R6M4 530 aa18.73■□□□□ 0.59
UBQLN1-201ENST00000257468 PRDM10Q9NQV6 1147 aa18.73■□□□□ 0.59
UBQLN1-201ENST00000257468 BARHL2Q9NY43 387 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms