RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 MAP3K7O43318 606 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 MTRF1O75570 445 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 EIF2S1P05198 315 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 ST13P50502 369 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 CLCN2P51788 898 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 IGBP1P78318 339 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 IRX4P78413 519 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 RUFY4Q6ZNE9 571 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 CCDC13Q8IYE1 715 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 LRRC45Q96CN5 670 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 TMCC3Q9ULS5 477 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 ABCA9Q8IUA7 1624 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 NPC1L1Q9UHC9 1359 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 ARHGAP10A1A4S6 786 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 HPDP32754 393 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 DAB2P98082 770 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 APBA1Q02410 837 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 VSIG1Q86XK7 387 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 PPANQ9NQ55 473 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 IMPACTQ9P2X3 320 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 MYO1AQ9UBC5 1043 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 YEATS2Q9ULM3 1422 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 POLR3AO14802 1390 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 DKC1O60832 514 aaKnown RBP eCLIP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 DSTYKQ6XUX3 929 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 MYCLP1P12525 358 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 LRPAP1P30533 357 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 FAM133BQ5BKY9 247 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 USP48Q86UV5 1035 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 SNX32Q86XE0 403 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 STX12Q86Y82 276 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 HAUS8Q9BT25 410 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 MOV10L1Q9BXT6 1211 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GDPD2Q9HCC8 539 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 NOB1Q9ULX3 412 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 DIS3Q9Y2L1 958 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8QA0A0J9YX86 632 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8OA6NCC3 632 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8NF8WBI6 632 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 CPP00450 1065 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GNAI3P08754 354 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 SMTNP53814 917 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TBC1D10BQ4KMP7 808 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 NXNQ6DKJ4 435 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 ARHGEF2Q92974 986 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TSR2Q969E8 191 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 RBM41Q96IZ5 413 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TMCO1Q9UM00 188 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 CFAP73A6NFT4 308 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TXNDC9O14530 226 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 POLR2EP19388 210 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 MRPL12P52815 198 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 CNGA3Q16281 694 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 PARP10Q53GL7 1025 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 PALM2Q8IXS6 379 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 CCDC197Q8NCU1 140 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 RFWD2Q8NHY2 731 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 DHX36Q9H2U1 1008 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 RPAP3Q9H6T3 665 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TRIM37O94972 964 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 STAMBPO95630 424 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 KRT20P35900 424 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 BNIP1Q12981 228 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 C15orf59Q2T9L4 293 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 ZBTB41Q5SVQ8 909 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 PPP1R42Q7Z4L9 355 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 FAM9CQ8IZT9 166 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 ZKSCAN4Q969J2 545 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 FBXL5Q9UKA1 691 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 ACEP12821 1306 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 LINC00854A0A1B0GVQ3 168 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 POTEJP0CG39 1038 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 STIP1P31948 543 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 RAB27AP51159 221 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 C11orf91Q3C1V1 193 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 SRGAP1Q7Z6B7 1085 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 C11orf74Q86VG3 221 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TTC30AQ86WT1 665 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 SLF2Q8IX21 1173 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 NBPF15Q8N660 670 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 RPGRQ92834 1020 aaKnown RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 RILPL2Q969X0 211 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 CFAP36Q96G28 342 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 FTOQ9C0B1 505 aaKnown RBP eCLIP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GPBP1L1Q9HC44 474 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 AASDHPPTQ9NRN7 309 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TBC1D23Q9NUY8 699 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GALNT8Q9NY28 637 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8JA6NMD2 632 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8BA8MQT2 603 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8TH3BQL2 631 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8HP0CJ92 632 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 CYP11B2P19099 503 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 SERPINB3P29508 390 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 GUCY1B3Q02153 619 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 ZNF530Q6P9A1 599 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 TMEM154Q6P9G4 183 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 ZNF554Q86TJ5 538 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 KIRREL3Q8IZU9 778 aa7.43□□□□□ -1.22
PDGFRA-201ENST00000257290 CDHR1Q96JP9 859 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms