RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 RTKN2Q8IZC4 609 aa18.79■□□□□ 0.6
SORT1-201ENST00000256637 RETREG2Q8NC44 543 aa18.79■□□□□ 0.6
SORT1-201ENST00000256637 UBLCP1Q8WVY7 318 aaPredicted RBP18.79■□□□□ 0.6
SORT1-201ENST00000256637 DMP1Q13316 513 aaPredicted RBP18.78■□□□□ 0.6
SORT1-201ENST00000256637 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 MEIS1O00470 390 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 NEMFO60524 1076 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 IFNL3Q8IZI9 196 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 CCDC127Q96BQ5 260 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 TDRD3Q9H7E2 651 aaKnown RBP18.78■□□□□ 0.6
SORT1-201ENST00000256637 CFAP43Q8NDM7 1665 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 POTEB2H3BUK9 544 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 TBC1D31Q96DN5 1066 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 CEP112Q8N8E3 955 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 HGSO14964 777 aaPredicted RBP18.78■□□□□ 0.6
SORT1-201ENST00000256637 CACNB1Q02641 598 aaPredicted RBP18.78■□□□□ 0.6
SORT1-201ENST00000256637 ARHGAP45Q92619 1136 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 ZNF577Q9BSK1 485 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 KLRF2D3W0D1 207 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
SORT1-201ENST00000256637 STK10O94804 968 aaKnown RBP18.78■□□□□ 0.6
SORT1-201ENST00000256637 UPP2O95045 317 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 USP17L8P0C7I0 530 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 PLCD1P51178 756 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 MTERF2Q49AM1 385 aa18.78■□□□□ 0.6
SORT1-201ENST00000256637 GJD4Q96KN9 370 aaPredicted RBP18.78■□□□□ 0.6
SORT1-201ENST00000256637 P4HA1P13674 534 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 ZNF569Q5MCW4 686 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 COA7Q96BR5 231 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 NLRP4Q96MN2 994 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 STK24Q9Y6E0 443 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 NME8Q8N427 588 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 TMEM87BQ96K49 555 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 TACC1O75410 805 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 XPAP23025 273 aaPredicted RBP18.77■□□□□ 0.6
SORT1-201ENST00000256637 KAZNQ674X7 775 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 SND1Q7KZF4 910 aaKnown RBP eCLIP18.77■□□□□ 0.68e-7■■■■□ 25.9
SORT1-201ENST00000256637 TIGD1Q96MW7 591 aa18.77■□□□□ 0.6
SORT1-201ENST00000256637 ZBTB16Q05516 673 aa18.77■□□□□ 0.59
SORT1-201ENST00000256637 KIF5AQ12840 1032 aa18.77■□□□□ 0.59
SORT1-201ENST00000256637 TMCO4Q5TGY1 634 aa18.77■□□□□ 0.59
SORT1-201ENST00000256637 ZCCHC11Q5TAX3 1644 aaKnown RBP18.77■□□□□ 0.59
SORT1-201ENST00000256637 ELP3Q9H9T3 547 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 PIDD1Q9HB75 910 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.76■□□□□ 0.59
SORT1-201ENST00000256637 V9GYY5 206 aaPredicted RBP18.76■□□□□ 0.59
SORT1-201ENST00000256637 E7EWF7 191 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 TPD52P55327 224 aaPredicted RBP18.76■□□□□ 0.59
SORT1-201ENST00000256637 DIS3L2Q8IYB7 885 aaKnown RBP18.76■□□□□ 0.59
SORT1-201ENST00000256637 PNMA1Q8ND90 353 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 RASGRP4Q8TDF6 673 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 PCDHA1Q9Y5I3 950 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 POMGNT1Q8WZA1 660 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 NOX5Q96PH1 765 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.76■□□□□ 0.59
SORT1-201ENST00000256637 NLRP1Q9C000 1473 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 FOXD4Q12950 439 aaPredicted RBP18.76■□□□□ 0.59
SORT1-201ENST00000256637 M0R2C6 588 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 CHMP6Q96FZ7 201 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
SORT1-201ENST00000256637 ATP2A1O14983 1001 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 JAK2O60674 1132 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 STAT2P52630 851 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 MIS18BP1Q6P0N0 1132 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 C7orf31Q8N865 590 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
SORT1-201ENST00000256637 SUSD4Q5VX71 490 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 CSGALNACT2Q8N6G5 542 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 LMBR1Q8WVP7 490 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 SPDYE2BA6NHP3 402 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 SPDYE6P0CI01 402 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 CCDC157Q569K6 752 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 DCLK2Q8N568 766 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 RHOXF2BP0C7M4 288 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 ITIH3Q06033 890 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 LBHD1Q9BQE6 289 aaPredicted RBP18.75■□□□□ 0.59
SORT1-201ENST00000256637 RHOXF2Q9BQY4 288 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 DNAI1Q9UI46 699 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 MCM3P25205 808 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 HINFPQ9BQA5 517 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 ADGBQ8N7X0 1667 aa18.75■□□□□ 0.59
SORT1-201ENST00000256637 ELF1P32519 619 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 HDAC1Q13547 482 aaPredicted RBP18.74■□□□□ 0.59
SORT1-201ENST00000256637 KRT25Q7Z3Z0 450 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 PCIF1Q9H4Z3 704 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 KDM5CP41229 1560 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 GSDMDP57764 484 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
SORT1-201ENST00000256637 PANK4Q9NVE7 773 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 PRPHP41219 470 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 HLFQ16534 295 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 UBE2SQ16763 222 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 RAVER2Q9HCJ3 691 aaKnown RBP18.74■□□□□ 0.59
SORT1-201ENST00000256637 PCDHA12Q9UN75 941 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 EEF2KMTQ96G04 330 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 GCNAQ96QF7 691 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 ZNF654Q8IZM8 581 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 NRBP2Q9NSY0 501 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 C1orf228Q6PIY5 440 aa18.74■□□□□ 0.59
SORT1-201ENST00000256637 METTL23Q86XA0 190 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms