RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 ORC4O43929 436 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 CUTAO60888 179 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 PRDM1O75626 825 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 GUCY1A2P33402 732 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 SYKP43405 635 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 ZNF75DP51815 510 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 IQCB1Q15051 598 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 PTPAQ15257 358 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 C11orf57Q6ZUT1 292 aaPredicted RBP13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 PLA2G4DQ86XP0 818 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 ZSCAN29Q8IWY8 852 aaPredicted RBP13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 SLC44A5Q8NCS7 719 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 TIGD1Q96MW7 591 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 ADARB2Q9NS39 739 aaKnown RBP13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 KIAA1468Q9P260 1216 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 BTBD18B2RXH4 712 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 ENTPD3O75355 529 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 DDAH1O94760 285 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 NT5C2P49902 561 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 RILPL1Q5EBL4 403 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 ANGEL2Q5VTE6 544 aaKnown RBP13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 CDAN1Q8IWY9 1227 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 CMTR1Q8N1G2 835 aaKnown RBP13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 TMEM39BQ9GZU3 492 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 KCNJ14Q9UNX9 436 aa13.09□□□□□ -0.31
CLUHP3-201ENST00000254109 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 EPHX2P34913 555 aa13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 SARM1Q6SZW1 724 aa13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 AMOTL1Q8IY63 956 aa13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 SIPA1L1O43166 1804 aa13.08□□□□□ -0.32
CLUHP3-201ENST00000254109 FAM196BA6NMK8 535 aa13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 PRPF3O43395 683 aaKnown RBP13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 RASA3Q14644 834 aa13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 RESP18Q5W5W9 173 aa13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 CTCFLQ8NI51 663 aaPredicted RBP13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 FAM151AQ8WW52 585 aa13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 TAF1DQ9H5J8 278 aaPredicted RBP13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 WDR90Q96KV7 1748 aa13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 SCN4AP35499 1836 aa13.07□□□□□ -0.32
CLUHP3-201ENST00000254109 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 CDC25BP30305 580 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 TERF1P54274 439 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 PRAMEF18Q5VWM3 479 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 DHX40Q8IX18 779 aaKnown RBP13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 HPSEQ9Y251 543 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 ROBO3Q96MS0 1386 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 TPM2P07951 284 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 KRT2P35908 639 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 CDK8P49336 464 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 NLRP12P59046 1061 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 TPM4P67936 248 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 TROAPQ12815 778 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 NOLC1Q14978 699 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 EAPPQ56P03 285 aaPredicted RBP13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 FKBP1CQ5VVH2 108 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 DLK2Q6UY11 383 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 FAM83AQ86UY5 434 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 ERCC4Q92889 916 aaPredicted RBP13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 DHX36Q9H2U1 1008 aaKnown RBP13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 RRAGCQ9HB90 399 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 BRMS1Q9HCU9 246 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 FAM13BQ9NYF5 915 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 CLIP2Q9UDT6 1046 aa13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
CLUHP3-201ENST00000254109 GABPAQ06546 454 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 FAM47AQ5JRC9 791 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 DNTTIP2Q5QJE6 756 aaKnown RBP13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 C16orf86Q6ZW13 317 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 AOPEPQ8N6M6 819 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 DEFB129Q9H1M3 183 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 PI4KBQ9UBF8 816 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 PGAP2Q9UHJ9 254 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 SERPINB13Q9UIV8 391 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
CLUHP3-201ENST00000254109 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 PTGS1P23219 599 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 TNNI2P48788 182 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms