RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 A0A1B0GTH6 734 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 TSPY3P0CV98 308 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 TSPY8P0CW00 308 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 CALML3P27482 149 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 ADKP55263 362 aaKnown RBP22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 CT47A1Q5JQC4 288 aaPredicted RBP22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 SPATA1Q5VX52 437 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 PDXDC2PQ6P474 469 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 MAPKAPK5Q8IW41 473 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 REXO1L1PQ8IX06 675 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 MTRQ99707 1265 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 RTFDC1Q9BY42 306 aaPredicted RBP22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 BLZF1Q9H2G9 400 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 L2HGDHQ9H9P8 463 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 SH3GLB2Q9NR46 395 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 SAP30BPQ9UHR5 308 aaKnown RBP22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 CYTH3O43739 400 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 C15orf52Q6ZUT6 534 aaKnown RBP22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 HOMER1Q86YM7 354 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 PCDHA4Q9UN74 947 aa22.19■■□□□ 1.14
CDC42EP1-201ENST00000249014 M0R2N6 131 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 CCP110O43303 1012 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 IGSF3O75054 1194 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 TRIM65Q6PJ69 517 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 IQUBQ8NA54 791 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 BAG1Q99933 345 aaPredicted RBP22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 TCP11L1Q9NUJ3 509 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 MTMR7Q9Y216 660 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 ARHGAP6O43182 974 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 TEX33O43247 280 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 SLU7O95391 586 aaKnown RBP22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 ETF1P62495 437 aaKnown RBP22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 ERO1AQ96HE7 468 aa22.18■■□□□ 1.14
CDC42EP1-201ENST00000249014 FANCGO15287 622 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 RASA1P20936 1047 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 CDC25AP30304 524 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 NT5C2P49902 561 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 CCDC93Q567U6 631 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 CDKAL1Q5VV42 579 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 FCHSD1Q86WN1 690 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 AMOTL1Q8IY63 956 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 ZNF444Q8N0Y2 327 aaPredicted RBP22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 RPGRQ92834 1020 aaKnown RBP22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 CD209Q9NNX6 404 aa22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 DDX60LQ5H9U9 1706 aaKnown RBP22.17■■□□□ 1.14
CDC42EP1-201ENST00000249014 ARL6IP4Q66PJ3 421 aaKnown RBP22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 WWC2Q6AWC2 1192 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 RASGRP2Q7LDG7 609 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 TMEM47Q9BQJ4 181 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 STX8Q9UNK0 236 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 UBR3Q6ZT12 1888 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 UFL1O94874 794 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 TUBB4AP04350 444 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 LDHCP07864 332 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 BTDP43251 543 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 DNAI1Q9UI46 699 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 PPP2R2CQ9Y2T4 447 aa22.16■■□□□ 1.14
CDC42EP1-201ENST00000249014 STX10O60499 249 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 CRY2Q49AN0 593 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 LRRN4CLQ8ND94 238 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 PCDHA6Q9UN73 950 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 PCDHA8Q9Y5H6 950 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 SNED1Q8TER0 1413 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 PALM3A6NDB9 673 aaPredicted RBP22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 COBLO75128 1261 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 GNAQP50148 359 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 CCDC178Q5BJE1 867 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 CERKQ8TCT0 537 aa22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 CGNQ9P2M7 1197 aaKnown RBP22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 ADD3Q9UEY8 706 aaKnown RBP22.15■■□□□ 1.14
CDC42EP1-201ENST00000249014 GOLGA8HP0CJ92 632 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 LONP1P36776 959 aaKnown RBP22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 CBX1P83916 185 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 ELF2Q15723 593 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 CTNND2Q9UQB3 1225 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 PHLPP2Q6ZVD8 1323 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 EP400Q96L91 3159 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 SPDYE4A6NLX3 237 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 STXBP3O00186 592 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 IL1R1P14778 569 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 TOGARAM2Q6ZUX3 1019 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 HEATR3Q7Z4Q2 680 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 GJD4Q96KN9 370 aaPredicted RBP22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 CPVLQ9H3G5 476 aa22.14■■□□□ 1.13
CDC42EP1-201ENST00000249014 GPR75-ASB3A0A0A6YYF3 556 aa22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 CCDC194A0A1B0GVG4 234 aa22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 ZSCAN12O43309 604 aa22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 GTPBP6O43824 516 aaPredicted RBP22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 GYS1P13807 737 aa22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 PBX1P40424 430 aa22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 PYM1Q9BRP8 204 aaKnown RBP22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 TMEM60Q9H2L4 133 aa22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 BARHL2Q9NY43 387 aa22.13■■□□□ 1.13
CDC42EP1-201ENST00000249014 MYH1P12882 1939 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 CDK8P49336 464 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 KARSQ15046 597 aaKnown RBP22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 DAGLBQ8NCG7 672 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 ADRA2BP18089 450 aa22.12■■□□□ 1.13
CDC42EP1-201ENST00000249014 INF2Q27J81 1249 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms