RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TTLL1O95922 423 aa19.58■□□□□ 0.72
CDKN1A-201ENST00000244741 ECE1P42892 770 aa19.58■□□□□ 0.72
CDKN1A-201ENST00000244741 FOSBP53539 338 aa19.58■□□□□ 0.72
CDKN1A-201ENST00000244741 MAP3K11Q16584 847 aa19.58■□□□□ 0.72
CDKN1A-201ENST00000244741 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.58■□□□□ 0.72
CDKN1A-201ENST00000244741 ACER1Q8TDN7 264 aa19.58■□□□□ 0.72
CDKN1A-201ENST00000244741 HOOK2Q96ED9 719 aa19.58■□□□□ 0.72
CDKN1A-201ENST00000244741 AP5Z1O43299 807 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 ADD1P35611 737 aaKnown RBP19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 ZYXQ15942 572 aaKnown RBP19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 SYNE3Q6ZMZ3 975 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 CATIPQ7Z7H3 387 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 TMTC2Q8N394 836 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 CCDC82Q8N4S0 544 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 KANSL2Q9H9L4 492 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 TAOK2Q9UL54 1235 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 A0A1W2PRG0 241 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 PPP1R12BO60237 982 aaPredicted RBP19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 CDC27P30260 824 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 NF2P35240 595 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 EVCP57679 992 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 ZNF274Q96GC6 653 aaPredicted RBP19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 MTA3Q9BTC8 594 aa19.57■□□□□ 0.72
CDKN1A-201ENST00000244741 GOLGA8AA7E2F4 631 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 CTNND1O60716 968 aaKnown RBP19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 HMGN5P82970 282 aaKnown RBP19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 CKAP2LQ8IYA6 745 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 ASNSP08243 561 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 GOLGA8HP0CJ92 632 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 TOP1P11387 765 aaKnown RBP19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 TROAPQ12815 778 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 DGKZQ13574 1117 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.56■□□□□ 0.722e-7■■■□□ 15.4
CDKN1A-201ENST00000244741 CLMNQ96JQ2 1002 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 TNMDQ9H2S6 317 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 ZNF112Q9UJU3 913 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 MRVI1Q9Y6F6 885 aa19.56■□□□□ 0.72
CDKN1A-201ENST00000244741 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 NR1I2O75469 434 aa19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 TYRO3Q06418 890 aa19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 VGLL4Q14135 290 aa19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 CCDC178Q5BJE1 867 aa19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 ZNF830Q96NB3 372 aaPredicted RBP19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 DDX19AQ9NUU7 478 aaKnown RBP19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 GREB1LQ9C091 1923 aaPredicted RBP19.55■□□□□ 0.72
CDKN1A-201ENST00000244741 YY1P25490 414 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 PLCB2Q00722 1185 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 CHADLQ6NUI6 762 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 SPICE1Q8N0Z3 855 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 BICD2Q8TD16 824 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 ANKS1AQ92625 1134 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 FAM217BQ9NTX9 383 aaPredicted RBP19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 CFAP45Q9UL16 551 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 USP17L5A8MUK1 530 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 KIF3CO14782 793 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 CELF2O95319 508 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 NOVP48745 357 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 NT5C2P49902 561 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 USP17L2Q6R6M4 530 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 SCYL3Q8IZE3 742 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 FANCBQ8NB91 859 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 CPVLQ9H3G5 476 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 MYH4Q9Y623 1939 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 BAZ2BQ9UIF8 2168 aaKnown RBP19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 ATAD5Q96QE3 1844 aa19.54■□□□□ 0.72
CDKN1A-201ENST00000244741 FRMPD2Q68DX3 1309 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 RBM43Q6ZSC3 357 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 STAG2Q8N3U4 1231 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 ITGBL1O95965 494 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 IREB2P48200 963 aaKnown RBP19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 MAP3K9P80192 1104 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 RTN1Q16799 776 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 FAM200AQ8TCP9 573 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 NUP88Q99567 741 aaPredicted RBP19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 FTOQ9C0B1 505 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 ELP3Q9H9T3 547 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 NYAP2Q9P242 653 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 KIF3AQ9Y496 699 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 ZHX2Q9Y6X8 837 aa19.53■□□□□ 0.72
CDKN1A-201ENST00000244741 PLEKHA8P1O95397 391 aa19.52■□□□□ 0.72
CDKN1A-201ENST00000244741 FDPSP14324 419 aaKnown RBP19.52■□□□□ 0.72
CDKN1A-201ENST00000244741 PTPRAP18433 802 aa19.52■□□□□ 0.72
CDKN1A-201ENST00000244741 GUCY1B3Q02153 619 aa19.52■□□□□ 0.72
CDKN1A-201ENST00000244741 KIAA1755Q5JYT7 1200 aa19.52■□□□□ 0.72
CDKN1A-201ENST00000244741 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
CDKN1A-201ENST00000244741 PHKBQ93100 1093 aa19.52■□□□□ 0.72
CDKN1A-201ENST00000244741 PCNTO95613 3336 aa19.52■□□□□ 0.71
CDKN1A-201ENST00000244741 TRIM75PA6NK02 468 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 CPLX1O14810 134 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 RCOR1Q9UKL0 485 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 R3HCC1Q9Y3T6 440 aaKnown RBP19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 SNCAIPQ9Y6H5 919 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 hCG_1642624A0A1W2PR95 340 aa19.51■□□□□ 0.71
CDKN1A-201ENST00000244741 DDAH1O94760 285 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms