RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 MRPL12P52815 198 aaKnown RBP10.35□□□□□ -0.75
COL21A1-201ENST00000244728 PDE4DQ08499 809 aa10.35□□□□□ -0.75
COL21A1-201ENST00000244728 SPATA1Q5VX52 437 aa10.35□□□□□ -0.75
COL21A1-201ENST00000244728 APOA5Q6Q788 366 aa10.35□□□□□ -0.75
COL21A1-201ENST00000244728 SMYD4Q8IYR2 804 aaPredicted RBP10.35□□□□□ -0.75
COL21A1-201ENST00000244728 ACRBPQ8NEB7 543 aa10.35□□□□□ -0.75
COL21A1-201ENST00000244728 BPIFA3Q9BQP9 254 aa10.35□□□□□ -0.75
COL21A1-201ENST00000244728 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
COL21A1-201ENST00000244728 CFAP58Q5T655 872 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 TRIML1Q8N9V2 468 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 USP40Q9NVE5 1235 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 H7C1W4 665 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 KCNQ2O43526 872 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 ZMYND10O75800 440 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 CETN1Q12798 172 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 DIXDC1Q155Q3 683 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 LRRC47Q8N1G4 583 aaKnown RBP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 PNMA1Q8ND90 353 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 GOPCQ9HD26 462 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 MED4Q9NPJ6 270 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 BIN2Q9UBW5 565 aaPredicted RBP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 H0YIN7 160 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 LIG3P49916 1009 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 NELFBQ8WX92 580 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 ATG3Q9NT62 314 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 CDC25AP30304 524 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 RASGRF1Q13972 1273 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 CASP8Q14790 479 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 LCORLQ8N3X6 602 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 ENOX1Q8TC92 643 aaKnown RBP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 PIH1D3Q9NQM4 214 aaKnown RBP10.34□□□□□ -0.75
COL21A1-201ENST00000244728 HOMER2Q9NSB8 354 aa10.34□□□□□ -0.75
COL21A1-201ENST00000244728 FRMPD2Q68DX3 1309 aaPredicted RBP10.33□□□□□ -0.76
COL21A1-201ENST00000244728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
COL21A1-201ENST00000244728 PPP4R3AQ6IN85 833 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 CEP57Q86XR8 500 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 OR8K1Q8NGG5 319 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 RASGRP4Q8TDF6 673 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 IRX2Q9BZI1 471 aaPredicted RBP10.33□□□□□ -0.76
COL21A1-201ENST00000244728 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 ZNF804BA4D1E1 1349 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 ANKRD62A6NC57 917 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 UBE3CQ15386 1083 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 INF2Q27J81 1249 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 CCDC91Q7Z6B0 441 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 ZSCAN10Q96SZ4 725 aaPredicted RBP10.33□□□□□ -0.76
COL21A1-201ENST00000244728 QTRT2Q9H974 415 aaKnown RBP10.33□□□□□ -0.76
COL21A1-201ENST00000244728 ZSWIM5Q9P217 1185 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 DDX39AO00148 427 aaKnown RBP10.33□□□□□ -0.76
COL21A1-201ENST00000244728 RNF40O75150 1001 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 CFBP00751 764 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 MCAMP43121 646 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 NR5A1Q13285 461 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 DCAF17Q5H9S7 520 aaPredicted RBP10.33□□□□□ -0.76
COL21A1-201ENST00000244728 ENGASEQ8NFI3 743 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 CSRNP2Q9H175 543 aa10.33□□□□□ -0.76
COL21A1-201ENST00000244728 MED23Q9ULK4 1368 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 PLA2G4AP47712 749 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 CCT5P48643 541 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 C8orf74Q6P047 294 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 CSGALNACT2Q8N6G5 542 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 BCAS4Q8TDM0 211 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 SECISBP2LQ93073 1101 aaKnown RBP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 L2HGDHQ9H9P8 463 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 LRWD1Q9UFC0 647 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 EPN1Q9Y6I3 576 aaPredicted RBP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 KCNJ18B7U540 433 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 ERCC5P28715 1186 aaPredicted RBP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 RNASE9P60153 205 aaKnown RBP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 KCNJ12Q14500 433 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 SV2BQ7L1I2 683 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 KCNB2Q92953 911 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 PLCD4Q9BRC7 762 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 NOC4LQ9BVI4 516 aaKnown RBP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 CLEC11AQ9Y240 323 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 VWDEQ8N2E2 1590 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 GSTTP1A0A1W2PQM5 241 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 SMCO2A6NFE2 343 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 KLRF2D3W0D1 207 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 H2AFXP16104 143 aaPredicted RBP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 HPDP32754 393 aaPredicted RBP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 ADD2P35612 726 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 GNGT1P63211 74 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 MORC3Q14149 939 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 NONOQ15233 471 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL21A1-201ENST00000244728 NCAPH2Q6IBW4 605 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 CCDC174Q6PII3 467 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 NELFCDQ8IXH7 590 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 LRRC27Q9C0I9 530 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 ANKARQ7Z5J8 1434 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms