RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 ADD1P35611 737 aaKnown RBP23.51■■□□□ 1.35
SNRPA-201ENST00000243563 METAP2P50579 478 aaKnown RBP eCLIP23.51■■□□□ 1.351e-7■■□□□ 12.1
SNRPA-201ENST00000243563 ZNF543Q08ER8 600 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 FANCBQ8NB91 859 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 MS4A4AQ96JQ5 239 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 GPCPD1Q9NPB8 672 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 PALM3A6NDB9 673 aaPredicted RBP23.51■■□□□ 1.35
SNRPA-201ENST00000243563 K7ELQ4 463 aaPredicted RBP23.51■■□□□ 1.35
SNRPA-201ENST00000243563 SLC10A3P09131 477 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 TREML2Q5T2D2 321 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 CCDC83Q8IWF9 413 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 GTF3C6Q969F1 213 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 GMCL1Q96IK5 515 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 C12orf42Q96LP6 360 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 SLKQ9H2G2 1235 aaPredicted RBP23.51■■□□□ 1.35
SNRPA-201ENST00000243563 CREBZFQ9NS37 354 aa23.51■■□□□ 1.35
SNRPA-201ENST00000243563 CXCL11O14625 94 aa23.5■■□□□ 1.35
SNRPA-201ENST00000243563 CTDNEP1O95476 244 aa23.5■■□□□ 1.35
SNRPA-201ENST00000243563 RTN1Q16799 776 aa23.5■■□□□ 1.35
SNRPA-201ENST00000243563 CCDC96Q2M329 555 aa23.5■■□□□ 1.35
SNRPA-201ENST00000243563 SYNE3Q6ZMZ3 975 aa23.5■■□□□ 1.35
SNRPA-201ENST00000243563 DCAF4Q8WV16 495 aa23.5■■□□□ 1.35
SNRPA-201ENST00000243563 ZIC5Q96T25 663 aa23.5■■□□□ 1.35
SNRPA-201ENST00000243563 COL11A1P12107 1806 aaPredicted RBP23.49■■□□□ 1.35
SNRPA-201ENST00000243563 C19orf81C9J6K1 198 aa23.49■■□□□ 1.35
SNRPA-201ENST00000243563 SLC1A4P43007 532 aa23.49■■□□□ 1.35
SNRPA-201ENST00000243563 MCM2P49736 904 aa23.49■■□□□ 1.35
SNRPA-201ENST00000243563 USP14P54578 494 aa23.49■■□□□ 1.35
SNRPA-201ENST00000243563 CYP4F22Q6NT55 531 aa23.49■■□□□ 1.35
SNRPA-201ENST00000243563 HSCBQ8IWL3 235 aa23.49■■□□□ 1.35
SNRPA-201ENST00000243563 FBXO28Q9NVF7 368 aa23.49■■□□□ 1.35
SNRPA-201ENST00000243563 PARP1P09874 1014 aaKnown RBP23.48■■□□□ 1.35
SNRPA-201ENST00000243563 BMP3P12645 472 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 SLC16A2P36021 539 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 SLC4A3P48751 1232 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 RCAN1P53805 252 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 FUT2Q10981 343 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 NTRK3Q16288 839 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 GADL1Q6ZQY3 521 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 SRBD1Q8N5C6 995 aaKnown RBP23.48■■□□□ 1.35
SNRPA-201ENST00000243563 IL27Q8NEV9 243 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 ZSCAN31Q96LW9 406 aaPredicted RBP23.48■■□□□ 1.35
SNRPA-201ENST00000243563 MAP3K14Q99558 947 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 UBA5Q9GZZ9 404 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 CALM1P0DP23 149 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 CALM2P0DP24 149 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 CALM3P0DP25 149 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 ZBTB48P10074 688 aaPredicted RBP23.48■■□□□ 1.35
SNRPA-201ENST00000243563 GPAT2Q6NUI2 795 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 BRI3BPQ8WY22 251 aa23.48■■□□□ 1.35
SNRPA-201ENST00000243563 RPAP3Q9H6T3 665 aaPredicted RBP23.48■■□□□ 1.35
SNRPA-201ENST00000243563 RASSF10A6NK89 507 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 CYTH3O43739 400 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 GRM1Q13255 1194 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 SNAPC2Q13487 334 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 TMTC3Q6ZXV5 915 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 CCDC82Q8N4S0 544 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 CTCFLQ8NI51 663 aaPredicted RBP23.47■■□□□ 1.35
SNRPA-201ENST00000243563 LPAR1Q92633 364 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 HHIPL1Q96JK4 782 aa23.47■■□□□ 1.35
SNRPA-201ENST00000243563 SH2B1Q9NRF2 756 aaPredicted RBP23.47■■□□□ 1.35
SNRPA-201ENST00000243563 ISY1Q9ULR0 285 aaKnown RBP23.47■■□□□ 1.35
SNRPA-201ENST00000243563 TMEM232C9JQI7 657 aa23.46■■□□□ 1.35
SNRPA-201ENST00000243563 KLRF2D3W0D1 207 aa23.46■■□□□ 1.35
SNRPA-201ENST00000243563 WDR46O15213 610 aaKnown RBP23.46■■□□□ 1.35
SNRPA-201ENST00000243563 CUL4AQ13619 759 aa23.46■■□□□ 1.35
SNRPA-201ENST00000243563 ASPRV1Q53RT3 343 aa23.46■■□□□ 1.35
SNRPA-201ENST00000243563 TMOD4Q9NZQ9 345 aa23.46■■□□□ 1.35
SNRPA-201ENST00000243563 CNTNAP5Q8WYK1 1306 aa23.46■■□□□ 1.35
SNRPA-201ENST00000243563 A0A0G2JMZ2 1700 aa23.45■■□□□ 1.34
SNRPA-201ENST00000243563 JAK2O60674 1132 aa23.45■■□□□ 1.34
SNRPA-201ENST00000243563 PAXIP1Q6ZW49 1069 aaPredicted RBP23.45■■□□□ 1.34
SNRPA-201ENST00000243563 PTPN18Q99952 460 aa23.45■■□□□ 1.34
SNRPA-201ENST00000243563 FOXD4L1Q9NU39 408 aa23.45■■□□□ 1.34
SNRPA-201ENST00000243563 SMCHD1A6NHR9 2005 aa23.45■■□□□ 1.34
SNRPA-201ENST00000243563 CCL15-CCL14A0A0B4J2E2 113 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 ANP32AP39687 249 aaKnown RBP23.44■■□□□ 1.34
SNRPA-201ENST00000243563 CCL15Q16663 113 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 PROCA1Q8NCQ7 364 aaPredicted RBP23.44■■□□□ 1.34
SNRPA-201ENST00000243563 PHKBQ93100 1093 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 TANGO6Q9C0B7 1094 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 hCG_1642624A0A1W2PR95 340 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 GTF2A2P52657 109 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 SNAP25P60880 206 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 DEFB115Q30KQ5 88 aa23.44■■□□□ 1.34
SNRPA-201ENST00000243563 NSUN7Q8NE18 718 aaKnown RBP23.44■■□□□ 1.34
SNRPA-201ENST00000243563 AOC2O75106 756 aa23.43■■□□□ 1.34
SNRPA-201ENST00000243563 KIF5BP33176 963 aa23.43■■□□□ 1.34
SNRPA-201ENST00000243563 GPATCH4Q5T3I0 446 aaKnown RBP23.43■■□□□ 1.34
SNRPA-201ENST00000243563 POTEEQ6S8J3 1075 aa23.43■■□□□ 1.34
SNRPA-201ENST00000243563 SAMD1Q6SPF0 538 aaPredicted RBP23.43■■□□□ 1.34
SNRPA-201ENST00000243563 SPRYD3Q8NCJ5 442 aa23.43■■□□□ 1.34
SNRPA-201ENST00000243563 PIBF1Q8WXW3 757 aa23.43■■□□□ 1.34
SNRPA-201ENST00000243563 RBM28Q9NW13 759 aaKnown RBP23.43■■□□□ 1.34
SNRPA-201ENST00000243563 BTBD19C9JJ37 291 aa23.42■■□□□ 1.34
SNRPA-201ENST00000243563 CETPP11597 493 aa23.42■■□□□ 1.34
SNRPA-201ENST00000243563 BTNL9Q6UXG8 535 aa23.42■■□□□ 1.34
SNRPA-201ENST00000243563 CATSPERGQ6ZRH7 1159 aa23.42■■□□□ 1.34
SNRPA-201ENST00000243563 FAM43AQ8N2R8 423 aa23.42■■□□□ 1.34
SNRPA-201ENST00000243563 CAPNS2Q96L46 248 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms