RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 OVOS2A0A0G2JMS6 1433 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 MED23Q9ULK4 1368 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 GOLGA6CA6NDK9 693 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 A6NNZ2 444 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 GOLGA6DP0CG33 693 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 ADD1P35611 737 aaKnown RBP12.25□□□□□ -0.45
COPA-201ENST00000241704 CCZ1BP86790 482 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 CCZ1P86791 482 aaPredicted RBP12.25□□□□□ -0.45
COPA-201ENST00000241704 LETM2Q2VYF4 491 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 TUBB8Q3ZCM7 444 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 PI16Q6UXB8 463 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 PIK3AP1Q6ZUJ8 805 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 GOLGA6AQ9NYA3 693 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 PKD2L1Q9P0L9 805 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 TCP10L2B9ZVM9 353 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 NDUFAB1O14561 156 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 DONSONQ9NYP3 566 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 M0R2C6 588 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 ZBTB7AO95365 584 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 MYL5Q02045 173 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 CCDC93Q567U6 631 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 MYSM1Q5VVJ2 828 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 RSRC1Q96IZ7 334 aaKnown RBP12.25□□□□□ -0.45
COPA-201ENST00000241704 CABS1Q96KC9 395 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 TNKSO95271 1327 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 TDRD12Q587J7 1177 aaKnown RBP12.25□□□□□ -0.45
COPA-201ENST00000241704 TAF4BQ92750 862 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 JPH2Q9BR39 696 aaPredicted RBP12.25□□□□□ -0.45
COPA-201ENST00000241704 OSBPL5Q9H0X9 879 aaPredicted RBP12.25□□□□□ -0.45
COPA-201ENST00000241704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.25□□□□□ -0.457e-7■■■■□ 24.4
COPA-201ENST00000241704 ZNF446Q9NWS9 450 aa12.25□□□□□ -0.45
COPA-201ENST00000241704 ZMYM6O95789 1325 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 USO1O60763 962 aaKnown RBP12.24□□□□□ -0.45
COPA-201ENST00000241704 CCT5P48643 541 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 CORO7P57737 925 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 CKAP4Q07065 602 aaKnown RBP12.24□□□□□ -0.45
COPA-201ENST00000241704 HSP90AA4PQ58FG1 418 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 TTLL6Q8N841 843 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 BSDC1Q9NW68 430 aaPredicted RBP12.24□□□□□ -0.45
COPA-201ENST00000241704 KCNJ14Q9UNX9 436 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 SRGAP1Q7Z6B7 1085 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 CCDC114Q96M63 670 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 AS3MTQ9HBK9 375 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 CPSF2Q9P2I0 782 aaKnown RBP12.24□□□□□ -0.45
COPA-201ENST00000241704 PLCD1P51178 756 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 CC2D2BQ6DHV5 1058 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 CCDC50Q8IVM0 306 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 PLEKHA4Q9H4M7 779 aa12.24□□□□□ -0.45
COPA-201ENST00000241704 RIMS1Q86UR5 1692 aaKnown RBP12.24□□□□□ -0.45
COPA-201ENST00000241704 PUS7LQ9H0K6 701 aaKnown RBP12.23□□□□□ -0.45
COPA-201ENST00000241704 LCMT1Q9UIC8 334 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 HSF2BPO75031 334 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 SCRN1Q12765 414 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 CCDC121Q6ZUS5 278 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 TACO1Q9BSH4 297 aaKnown RBP12.23□□□□□ -0.45
COPA-201ENST00000241704 NARFQ9UHQ1 456 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 RICTORQ6R327 1708 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 SOS2Q07890 1332 aaPredicted RBP12.23□□□□□ -0.45
COPA-201ENST00000241704 ZNF202O95125 648 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 NLRP12P59046 1061 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 AP1ARQ63HQ0 302 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 BCAS4Q8TDM0 211 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 DBNDD1Q9H9R9 158 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 HOMER2Q9NSB8 354 aa12.23□□□□□ -0.45
COPA-201ENST00000241704 ARHGEF28Q8N1W1 1705 aaKnown RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 NOP56O00567 594 aaKnown RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 RABL6Q3YEC7 729 aaPredicted RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 KRT25Q7Z3Z0 450 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 PAGR1Q9BTK6 254 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 VPS54Q9P1Q0 977 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 BTDP43251 543 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 RASGRF1Q13972 1273 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 KIF22Q14807 665 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 SPATS2Q86XZ4 545 aaKnown RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 PLCD4Q9BRC7 762 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 MMRN2Q9H8L6 949 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 RNF40O75150 1001 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 MYCLP12524 364 aaPredicted RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 NONOQ15233 471 aaKnown RBP eCLIP12.22□□□□□ -0.45
COPA-201ENST00000241704 FERMT2Q96AC1 680 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 NAPGQ99747 312 aaPredicted RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 GOPCQ9HD26 462 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 RAD17O75943 681 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 TBC1D8O95759 1140 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 NEFHP12036 1026 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 KRT13P13646 458 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 KCNJ6P48051 423 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 E4F1Q66K89 784 aaPredicted RBP12.22□□□□□ -0.45
COPA-201ENST00000241704 ADALQ6DHV7 355 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms