RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 LSM14BQ9BX40 385 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 NOC2LQ9Y3T9 749 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 FPGT-TNNI3KV9GXZ4 949 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 KDM5DQ9BY66 1539 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 BCL2L12Q9HB09 334 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 SPATS2LQ9NUQ6 558 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 C1orf112Q9NSG2 853 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 TRAPPC8Q9Y2L5 1435 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 STAT1P42224 750 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 AZI2Q9H6S1 392 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 ZNF500O60304 480 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 KRT40Q6A162 431 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 CNOT10Q9H9A5 744 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 BABAM1Q9NWV8 329 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 MYO1AQ9UBC5 1043 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 BLMP54132 1417 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 EYA2O00167 538 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 DIXDC1Q155Q3 683 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 MYCT1Q8N699 235 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 ANKRD42Q8N9B4 389 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 OR8K1Q8NGG5 319 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 CLTAP09496 248 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 NBPF14Q5TI25 921 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 EIF3CLB5ME19 914 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 ATF2P15336 505 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 CD19P15391 556 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 SERPINB6P35237 376 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 PHEXP78562 749 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 NOSTRINQ8IVI9 506 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 DACT3Q96B18 629 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 SPDL1Q96EA4 605 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 EIF3CQ99613 913 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 PPP2R2CQ9Y2T4 447 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 SH3TC1Q8TE82 1336 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 ZC3H12CQ9C0D7 883 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 UNC13AQ9UPW8 1703 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 LRRD1A4D1F6 860 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 GSTA1P08263 222 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 GSTA2P09210 222 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 FAM135BQ49AJ0 1406 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 INSRP06213 1382 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 TCP1P17987 556 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 FAM173BQ6P4H8 233 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 CCDC197Q8NCU1 140 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 GPCPD1Q9NPB8 672 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 TBC1D7Q9P0N9 293 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 TTLL3Q9Y4R7 772 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 BZW2Q9Y6E2 419 aaKnown RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 V9GY48 417 aaPredicted RBP7.41□□□□□ -1.22
CSMD2-201ENST00000241312 A0A1W2PP64 1363 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 UFL1O94874 794 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 CHRNA2Q15822 529 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 RGS12O14924 1447 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 NPC1L1Q9UHC9 1359 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 GOLGA8CPA6NN73 597 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 DNM2P50570 870 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 NCAPH2Q6IBW4 605 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 IPO11Q9UI26 975 aaKnown RBP7.4□□□□□ -1.22
CSMD2-201ENST00000241312 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 FBXO31Q5XUX0 539 aaPredicted RBP7.4□□□□□ -1.22
CSMD2-201ENST00000241312 CFAP61Q8NHU2 1237 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 EFCC1Q9HA90 598 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.22
CSMD2-201ENST00000241312 APPBP2Q92624 585 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 DESI2Q9BSY9 194 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 HAUS4Q9H6D7 363 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 INPP1P49441 399 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 PNOCQ13519 176 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 RBM17Q96I25 401 aaKnown RBP7.4□□□□□ -1.22
CSMD2-201ENST00000241312 PDE11AQ9HCR9 933 aa7.4□□□□□ -1.22
CSMD2-201ENST00000241312 PFDN1O60925 122 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 PALM2Q8IXS6 379 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 WHAMMQ8TF30 809 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 ARMCX3Q9UH62 379 aaPredicted RBP7.4□□□□□ -1.23
CSMD2-201ENST00000241312 SOS2Q07890 1332 aaPredicted RBP7.4□□□□□ -1.23
CSMD2-201ENST00000241312 LIG3P49916 1009 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 EDC4Q6P2E9 1401 aaKnown RBP7.4□□□□□ -1.23
CSMD2-201ENST00000241312 ATF7P17544 494 aaPredicted RBP7.4□□□□□ -1.23
CSMD2-201ENST00000241312 ATP1A2P50993 1020 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 CXorf38Q8TB03 319 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 U2AF1L4Q8WU68 220 aaKnown RBP7.4□□□□□ -1.23
CSMD2-201ENST00000241312 LMBRD1Q9NUN5 540 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 NOD1Q9Y239 953 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 VAMP4O75379 141 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 IL9RQ01113 521 aa7.4□□□□□ -1.23
CSMD2-201ENST00000241312 CCDC124Q96CT7 223 aaKnown RBP7.4□□□□□ -1.23
CSMD2-201ENST00000241312 LMNB2Q03252 620 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 RTCBQ9Y3I0 505 aaKnown RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 KIF24Q5T7B8 1368 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PARP10Q53GL7 1025 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 OTUD7BQ6GQQ9 843 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 RIOK1Q9BRS2 568 aaKnown RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 EFHD1Q9BUP0 239 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 MROH5Q6ZUA9 1318 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 GAS7O60861 476 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 DMP1Q13316 513 aaPredicted RBP7.39□□□□□ -1.23
CSMD2-201ENST00000241312 ADALQ6DHV7 355 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 NXNQ6DKJ4 435 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 HACE1Q8IYU2 909 aa7.39□□□□□ -1.23
CSMD2-201ENST00000241312 PDZD8Q8NEN9 1154 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms