RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 NPY5RQ15761 445 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 RAD9BQ6WBX8 426 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 SMYD4Q8IYR2 804 aaPredicted RBP17.63■□□□□ 0.41
CTSD-201ENST00000236671 IGSF22Q8N9C0 903 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 GSDMAQ96QA5 445 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 SGIP1Q9BQI5 828 aa17.63■□□□□ 0.41
CTSD-201ENST00000236671 NAA15Q9BXJ9 866 aaKnown RBP17.63■□□□□ 0.41
CTSD-201ENST00000236671 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
CTSD-201ENST00000236671 COL24A1Q17RW2 1714 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 ATP8B1O43520 1251 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 TBC1D8O95759 1140 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 TROAPQ12815 778 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 NOM1Q5C9Z4 860 aaKnown RBP17.62■□□□□ 0.41
CTSD-201ENST00000236671 TEX35Q5T0J7 233 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 IFIT1BQ5T764 474 aaKnown RBP17.62■□□□□ 0.41
CTSD-201ENST00000236671 CC2D1AQ6P1N0 951 aaPredicted RBP17.62■□□□□ 0.41
CTSD-201ENST00000236671 CATIPQ7Z7H3 387 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 IRX2Q9BZI1 471 aaPredicted RBP17.62■□□□□ 0.41
CTSD-201ENST00000236671 UBXN6Q9BZV1 441 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 RBM28Q9NW13 759 aaKnown RBP17.62■□□□□ 0.41
CTSD-201ENST00000236671 ABCF2Q9UG63 623 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 ADGRG1Q9Y653 693 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 V9GY48 417 aaPredicted RBP17.62■□□□□ 0.41
CTSD-201ENST00000236671 TAF1P21675 1872 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 CYP2D7A0A087X1C5 515 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 SEMA3EO15041 775 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 SASH3O75995 380 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 TAF3Q5VWG9 929 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 PPFIBP1Q86W92 1011 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 CCDC12Q8WUD4 166 aaPredicted RBP17.62■□□□□ 0.41
CTSD-201ENST00000236671 RABGGTAQ92696 567 aa17.62■□□□□ 0.41
CTSD-201ENST00000236671 MYH2Q9UKX2 1941 aa17.61■□□□□ 0.41
CTSD-201ENST00000236671 MFAP3LO75121 409 aa17.61■□□□□ 0.41
CTSD-201ENST00000236671 FGRP09769 529 aa17.61■□□□□ 0.41
CTSD-201ENST00000236671 ATP2C1P98194 919 aaPredicted RBP17.61■□□□□ 0.41
CTSD-201ENST00000236671 CLEC4GQ6UXB4 293 aa17.61■□□□□ 0.41
CTSD-201ENST00000236671 NLGN1Q8N2Q7 840 aa17.61■□□□□ 0.41
CTSD-201ENST00000236671 CTAGE1Q96RT6 745 aa17.61■□□□□ 0.41
CTSD-201ENST00000236671 GYG1P46976 350 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 DYNLL1P63167 89 aaKnown RBP17.6■□□□□ 0.41
CTSD-201ENST00000236671 ZNF174Q15697 407 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 TTC38Q5R3I4 469 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 BRIP1Q9BX63 1249 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 ZNF652Q9Y2D9 606 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 CNTNAP5Q8WYK1 1306 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 A0A1B0GUL6 1792 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 ANKRD31Q8N7Z5 1873 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 A0A0U1RQJ8 604 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 SERPINB2P05120 415 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 E2F4Q16254 413 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 ATRIPQ8WXE1 791 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 GOLGA1Q92805 767 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 LZTFL1Q9NQ48 299 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 XDHP47989 1333 aa17.6■□□□□ 0.41
CTSD-201ENST00000236671 TNRC6CQ9HCJ0 1690 aaKnown RBP17.6■□□□□ 0.41
CTSD-201ENST00000236671 BAZ2AQ9UIF9 1905 aaKnown RBP17.6■□□□□ 0.41
CTSD-201ENST00000236671 ITIH6Q6UXX5 1313 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 DDAH1O94760 285 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 GYPCP04921 128 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 CALM1P0DP23 149 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 CALM2P0DP24 149 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 CALM3P0DP25 149 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 FECHP22830 423 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 NBPF5PQ86XG9 351 aaPredicted RBP17.59■□□□□ 0.41
CTSD-201ENST00000236671 SLC16A10Q8TF71 515 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 CPLX3Q8WVH0 158 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 PARD6BQ9BYG5 372 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
CTSD-201ENST00000236671 CASP14P31944 242 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 CYP2C19P33261 490 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 PTGDRQ13258 359 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 C3orf67Q6ZVT6 689 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 RASGRP2Q7LDG7 609 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 IQCA1Q86XH1 822 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 ZNF384Q8TF68 577 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 CTNND2Q9UQB3 1225 aa17.59■□□□□ 0.41
CTSD-201ENST00000236671 WTIPA6NIX2 430 aaPredicted RBP17.58■□□□□ 0.4
CTSD-201ENST00000236671 PCP11498 1178 aaKnown RBP17.58■□□□□ 0.4
CTSD-201ENST00000236671 FILIP1LQ4L180 1135 aa17.58■□□□□ 0.4
CTSD-201ENST00000236671 PRR5LQ6MZQ0 368 aa17.58■□□□□ 0.4
CTSD-201ENST00000236671 CCDC51Q96ER9 411 aa17.58■□□□□ 0.4
CTSD-201ENST00000236671 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
CTSD-201ENST00000236671 SPON1Q9HCB6 807 aa17.58■□□□□ 0.4
CTSD-201ENST00000236671 GNL3LQ9NVN8 582 aaKnown RBP17.58■□□□□ 0.4
CTSD-201ENST00000236671 TXLNAP40222 546 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 FXR1P51114 621 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTSD-201ENST00000236671 PDXDC2PQ6P474 469 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 SLC51AQ86UW1 340 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 CNGA4Q8IV77 575 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 STAMQ92783 540 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
CTSD-201ENST00000236671 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 CCDC66A2RUB6 948 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 ERICH4A6NGS2 130 aa17.57■□□□□ 0.4
CTSD-201ENST00000236671 KIF5CO60282 957 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms