RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 CAGE1Q8TC20 777 aa17.74■□□□□ 0.43
DDX1-201ENST00000233084 ARHGEF1Q92888 912 aaKnown RBP17.74■□□□□ 0.43
DDX1-201ENST00000233084 RRP36Q96EU6 259 aaKnown RBP17.74■□□□□ 0.43
DDX1-201ENST00000233084 FAM89AQ96GI7 184 aa17.74■□□□□ 0.43
DDX1-201ENST00000233084 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
DDX1-201ENST00000233084 HAUS7Q99871 368 aa17.74■□□□□ 0.43
DDX1-201ENST00000233084 DACH1Q9UI36 760 aa17.74■□□□□ 0.43
DDX1-201ENST00000233084 FRMD3A2A2Y4 597 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 RNF225M0QZC1 329 aaPredicted RBP17.73■□□□□ 0.43
DDX1-201ENST00000233084 NEBLO76041 1014 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 FNTAP49354 379 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 SYNE4Q8N205 404 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 PHKBQ93100 1093 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 DSCC1Q9BVC3 393 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 SRP68Q9UHB9 627 aaKnown RBP17.73■□□□□ 0.43
DDX1-201ENST00000233084 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 WWC3Q9ULE0 1092 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 COL24A1Q17RW2 1714 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 DDX60Q8IY21 1712 aaKnown RBP17.73■□□□□ 0.43
DDX1-201ENST00000233084 KRT40Q6A162 431 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 SND1Q7KZF4 910 aaKnown RBP eCLIP17.73■□□□□ 0.432e-6■□□□□ 9.4
DDX1-201ENST00000233084 MIEF2Q96C03 454 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 MAP3K14Q99558 947 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 NUP88Q99567 741 aaPredicted RBP17.73■□□□□ 0.43
DDX1-201ENST00000233084 LAMB2P55268 1798 aa17.73■□□□□ 0.43
DDX1-201ENST00000233084 PAX7P23759 505 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 MCM3P25205 808 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 CLEC4GQ6UXB4 293 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 APTXQ7Z2E3 356 aaKnown RBP17.72■□□□□ 0.43
DDX1-201ENST00000233084 CNGA4Q8IV77 575 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 SMYD4Q8IYR2 804 aaPredicted RBP17.72■□□□□ 0.43
DDX1-201ENST00000233084 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 ZNF185O15231 689 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 CASP1P29466 404 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 PPARDQ03181 441 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 MORC3Q14149 939 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 TRAPPC11Q7Z392 1133 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
DDX1-201ENST00000233084 SUSD4Q5VX71 490 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 KCTD16Q68DU8 428 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 CCNI2Q6ZMN8 369 aaPredicted RBP17.71■□□□□ 0.43
DDX1-201ENST00000233084 CEP57Q86XR8 500 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 SAR1BQ9Y6B6 198 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 UBE2Q2LH0YL09 131 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 RGL2O15211 777 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 PLCD1P51178 756 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 C2orf54Q08AI8 447 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 CHP1Q99653 195 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 ADD3Q9UEY8 706 aaKnown RBP17.71■□□□□ 0.43
DDX1-201ENST00000233084 MCM8Q9UJA3 840 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDX1-201ENST00000233084 MYH8P13535 1937 aa17.71■□□□□ 0.43
DDX1-201ENST00000233084 CHUKO15111 745 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 MEFVO15553 781 aaPredicted RBP17.71■□□□□ 0.42
DDX1-201ENST00000233084 TRDNQ13061 729 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 TMTC1Q8IUR5 882 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 KIRREL3Q8IZU9 778 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 SH2D3CQ8N5H7 860 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 KRI1Q8N9T8 703 aaKnown RBP17.71■□□□□ 0.42
DDX1-201ENST00000233084 ARL8AQ96BM9 186 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 ABHD10Q9NUJ1 306 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 PAG1Q9NWQ8 432 aa17.71■□□□□ 0.42
DDX1-201ENST00000233084 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.42
DDX1-201ENST00000233084 MAST3O60307 1309 aa17.7■□□□□ 0.42
DDX1-201ENST00000233084 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
DDX1-201ENST00000233084 DDR1Q08345 913 aa17.7■□□□□ 0.42
DDX1-201ENST00000233084 FILIP1LQ4L180 1135 aa17.7■□□□□ 0.42
DDX1-201ENST00000233084 TRAPPC3LQ5T215 181 aa17.7■□□□□ 0.42
DDX1-201ENST00000233084 LMBR1LQ6UX01 489 aa17.7■□□□□ 0.42
DDX1-201ENST00000233084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
DDX1-201ENST00000233084 RFX5P48382 616 aaPredicted RBP17.7■□□□□ 0.42
DDX1-201ENST00000233084 B4GALNT4Q76KP1 1039 aa17.7■□□□□ 0.42
DDX1-201ENST00000233084 PLA2G12BQ9BX93 195 aa17.7■□□□□ 0.42
DDX1-201ENST00000233084 M0R2C6 588 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 AFMP43652 599 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 PARP10Q53GL7 1025 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 VPS16Q9H269 839 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 KLC4Q9NSK0 619 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 MYO1AQ9UBC5 1043 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 ZMYM6O95789 1325 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 SYNRGQ9UMZ2 1314 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 FAM237AA0A1B0GTK4 181 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 C21orf2O43822 256 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 ZPR1O75312 459 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 CD44P16070 742 aaKnown RBP17.69■□□□□ 0.42
DDX1-201ENST00000233084 ADRA2BP18089 450 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 PBX1P40424 430 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 EZH2Q15910 746 aaKnown RBP17.69■□□□□ 0.42
DDX1-201ENST00000233084 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 CYP26C1Q6V0L0 522 aa17.69■□□□□ 0.42
DDX1-201ENST00000233084 A1CFQ9NQ94 594 aaKnown RBP17.69■□□□□ 0.42
DDX1-201ENST00000233084 FSBPO95073 299 aa17.68■□□□□ 0.42
DDX1-201ENST00000233084 NTSR2O95665 410 aa17.68■□□□□ 0.42
DDX1-201ENST00000233084 USP49Q70CQ1 688 aa17.68■□□□□ 0.42
DDX1-201ENST00000233084 HDAC7Q8WUI4 952 aa17.68■□□□□ 0.42
DDX1-201ENST00000233084 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms