RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 NUP133Q8WUM0 1156 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 TCP11Q8WWU5 503 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 CCDC102AQ96A19 550 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 TBCAO75347 108 aaKnown RBP9.37□□□□□ -0.91
SPARC-201ENST00000231061 TSPAN7P41732 249 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 UBE2HP62256 183 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 DNM1Q05193 864 aaKnown RBP9.37□□□□□ -0.91
SPARC-201ENST00000231061 ARHGEF6Q15052 776 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 RASA2Q15283 850 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 PCGF5Q86SE9 256 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 GBP7Q8N8V2 638 aaPredicted RBP9.37□□□□□ -0.91
SPARC-201ENST00000231061 KCNH5Q8NCM2 988 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 FSD1Q9BTV5 496 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 SRRTQ9BXP5 876 aaKnown RBP9.37□□□□□ -0.91
SPARC-201ENST00000231061 SLC5A4Q9NY91 659 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 HDAC4P56524 1084 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 ICA1Q05084 483 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 LRP8Q14114 963 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 KAZNQ674X7 775 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 CAPRIN2Q6IMN6 1127 aaKnown RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 KSR2Q6VAB6 950 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 TCEANC2Q96MN5 208 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 BOLA2Q9H3K6 86 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 DAAM1Q9Y4D1 1078 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 RBM8AQ9Y5S9 174 aaKnown RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 TLDC2A0PJX2 215 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 A6NCN8 305 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 M0R2C6 588 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 ALDH1L1O75891 902 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 DDX58O95786 925 aaKnown RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 Q4G0T1 1027 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 LRRC31Q6UY01 552 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 BTN2A1Q7KYR7 527 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 FERMT3Q86UX7 667 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 SPIRE2Q8WWL2 714 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 STON2Q8WXE9 905 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 SUCLG2Q96I99 432 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 FAM227BQ96M60 508 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 HPS4Q9NQG7 708 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 CLIC5Q9NZA1 410 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 GTF3C4Q9UKN8 822 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 ARHGAP23Q9P227 1491 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 C21orf2O43822 256 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 SLC4A1P02730 911 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 MYL6BP14649 208 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 GLULP15104 373 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 HPDP32754 393 aaPredicted RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 MCM5P33992 734 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 UBASH3AP57075 661 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 NMIQ13287 307 aaPredicted RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 SMC1AQ14683 1233 aaKnown RBP9.36□□□□□ -0.91
SPARC-201ENST00000231061 POSTNQ15063 836 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 RNF20Q5VTR2 975 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 IQCA1Q86XH1 822 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 ANKRD7Q92527 254 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 HYPKQ9NX55 129 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 SLIT1O75093 1534 aa9.36□□□□□ -0.91
SPARC-201ENST00000231061 MTRF1O75570 445 aaKnown RBP9.35□□□□□ -0.91
SPARC-201ENST00000231061 CPLX2Q6PUV4 134 aaKnown RBP9.35□□□□□ -0.91
SPARC-201ENST00000231061 KRT77Q7Z794 578 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 BICD2Q8TD16 824 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 SH3TC2Q8TF17 1288 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 C1orf74Q96LT6 269 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 ZSCAN31Q96LW9 406 aaPredicted RBP9.35□□□□□ -0.91
SPARC-201ENST00000231061 CCDC171Q6TFL3 1326 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 GRM8O00222 908 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 ADCY5O95622 1261 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 ABL1P00519 1130 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 COX10Q12887 443 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 NEDD9Q14511 834 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 MAP7D1Q3KQU3 841 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 VPS53Q5VIR6 699 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 TAOK1Q7L7X3 1001 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 CHPFQ8IZ52 775 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 ANKK1Q8NFD2 765 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 FAM81AQ8TBF8 368 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 PCDH12Q9NPG4 1184 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 C2CD2Q9Y426 696 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 ALOX15P16050 662 aaPredicted RBP9.35□□□□□ -0.91
SPARC-201ENST00000231061 STK3Q13188 491 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 CREB3L3Q68CJ9 461 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 GOLGA5Q8TBA6 731 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 KLHDC4Q8TBB5 520 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 CORO1BQ9BR76 489 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 SH2B1Q9NRF2 756 aaPredicted RBP9.35□□□□□ -0.91
SPARC-201ENST00000231061 KIF13AQ9H1H9 1805 aa9.35□□□□□ -0.91
SPARC-201ENST00000231061 SRGNP10124 158 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 SLC39A6Q13433 755 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 VPS33BQ9H267 617 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 TLR7Q9NYK1 1049 aaKnown RBP9.34□□□□□ -0.91
SPARC-201ENST00000231061 TRPC6Q9Y210 931 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 ANKRD65E5RJM6 399 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 GCP02774 474 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 CSE1LP55060 971 aaKnown RBP9.34□□□□□ -0.91
SPARC-201ENST00000231061 ME3Q16798 604 aa9.34□□□□□ -0.91
SPARC-201ENST00000231061 PPP4R4Q6NUP7 873 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms