RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 TTC36A6NLP5 189 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 KCNG1Q9UIX4 513 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 ABCC10Q5T3U5 1492 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 PTH1RQ03431 593 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 BSPRYQ5W0U4 402 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.74□□□□□ -0.37
LAMA4-201ENST00000230538 P3H4Q92791 437 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 CCDC51Q96ER9 411 aa12.74□□□□□ -0.37
LAMA4-201ENST00000230538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.74□□□□□ -0.37
LAMA4-201ENST00000230538 KIF3CO14782 793 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 PDE6BP35913 854 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 MORC3Q14149 939 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 KRT71Q3SY84 523 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 ZNF654Q8IZM8 581 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 XRCC5P13010 732 aaKnown RBP12.73□□□□□ -0.37
LAMA4-201ENST00000230538 ATP5JP18859 108 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 IRX3P78415 501 aaPredicted RBP12.73□□□□□ -0.37
LAMA4-201ENST00000230538 KRT81Q14533 505 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 PALM2Q8IXS6 379 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 PRPF31Q8WWY3 499 aaKnown RBP12.73□□□□□ -0.37
LAMA4-201ENST00000230538 ATP8A2Q9NTI2 1148 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 SAR1BQ9Y6B6 198 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 PFKFB1P16118 471 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
LAMA4-201ENST00000230538 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 ANKRD42Q8N9B4 389 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 ARHGEF10O15013 1369 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 TXNDC9O14530 226 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 STAT1P42224 750 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 CLNS1AP54105 237 aaKnown RBP12.73□□□□□ -0.37
LAMA4-201ENST00000230538 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 ARHGEF16Q5VV41 709 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 GDAP1L1Q96MZ0 367 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 KRT12Q99456 494 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 PHLDB2Q86SQ0 1253 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 ZSCAN10Q96SZ4 725 aaPredicted RBP12.73□□□□□ -0.37
LAMA4-201ENST00000230538 MED10Q9BTT4 135 aa12.73□□□□□ -0.37
LAMA4-201ENST00000230538 DDX41Q9UJV9 622 aaKnown RBP12.73□□□□□ -0.37
LAMA4-201ENST00000230538 TECP42680 631 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 SPOUT1Q5T280 376 aaKnown RBP12.72□□□□□ -0.37
LAMA4-201ENST00000230538 ANKRD20A3Q5VUR7 823 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 CCDC170Q8IYT3 715 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 FRMPD2Q68DX3 1309 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-201ENST00000230538 RGS16O15492 202 aaPredicted RBP12.72□□□□□ -0.37
LAMA4-201ENST00000230538 ABCB4P21439 1286 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 GUCY2FP51841 1108 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
LAMA4-201ENST00000230538 CTSWP56202 376 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 DNAJC10Q8IXB1 793 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 GLG1Q92896 1179 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 ST7Q9NRC1 585 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 TRPC6Q9Y210 931 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 METTL13Q8N6R0 699 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 CACYBPQ9HB71 228 aaKnown RBP12.72□□□□□ -0.37
LAMA4-201ENST00000230538 ZMYM3Q14202 1370 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 STAM2O75886 525 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 BRD1O95696 1058 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 STX2P32856 288 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 HSPA2P54652 639 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 CTAGE3PQ8IX95 158 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 BLIDQ8IZY5 108 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 TRIM58Q8NG06 486 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 CHURC1Q8WUH1 139 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 ADGBQ8N7X0 1667 aa12.72□□□□□ -0.37
LAMA4-201ENST00000230538 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.37
LAMA4-201ENST00000230538 NEURL1BA8MQ27 555 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 CTNNA1P35221 906 aaKnown RBP12.71□□□□□ -0.37
LAMA4-201ENST00000230538 GRK7Q8WTQ7 553 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 RPGRIP1Q96KN7 1286 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 MYSM1Q5VVJ2 828 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 TEKT1Q969V4 418 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 PANK4Q9NVE7 773 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 CD2APQ9Y5K6 639 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 A0A0D9SFI3 127 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 KCNK3O14649 394 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 RNF40O75150 1001 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 TROVE2P10155 538 aaKnown RBP eCLIP12.71□□□□□ -0.37
LAMA4-201ENST00000230538 PHBP35232 272 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 EIF4A1P60842 406 aaKnown RBP12.71□□□□□ -0.37
LAMA4-201ENST00000230538 BIRC2Q13490 618 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 FAM98CQ17RN3 349 aaKnown RBP12.71□□□□□ -0.37
LAMA4-201ENST00000230538 WHAMMP3Q1A5X7 153 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.37
LAMA4-201ENST00000230538 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 LPXNO60711 386 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 GNPTABQ3T906 1256 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 RNF10Q8N5U6 811 aaKnown RBP12.71□□□□□ -0.37
LAMA4-201ENST00000230538 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 ANO3Q9BYT9 981 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 TM6SF1Q9BZW5 370 aa12.71□□□□□ -0.37
LAMA4-201ENST00000230538 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms