RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 KIF3AQ9Y496 699 aa19.25■□□□□ 0.67
CHMP5-201ENST00000223500 AFG3L2Q9Y4W6 797 aa19.25■□□□□ 0.67
CHMP5-201ENST00000223500 MYH6P13533 1939 aa19.24■□□□□ 0.67
CHMP5-201ENST00000223500 SPDYE5A6NIY4 337 aa19.24■□□□□ 0.67
CHMP5-201ENST00000223500 KLRF2D3W0D1 207 aa19.24■□□□□ 0.67
CHMP5-201ENST00000223500 BMP3P12645 472 aa19.24■□□□□ 0.67
CHMP5-201ENST00000223500 AKAP17AQ02040 695 aaKnown RBP19.24■□□□□ 0.67
CHMP5-201ENST00000223500 SSRP1Q08945 709 aaKnown RBP19.24■□□□□ 0.67
CHMP5-201ENST00000223500 ZYXQ15942 572 aaKnown RBP19.24■□□□□ 0.67
CHMP5-201ENST00000223500 ZNF784Q8NCA9 323 aaPredicted RBP19.24■□□□□ 0.67
CHMP5-201ENST00000223500 SMARCC2Q8TAQ2 1214 aa19.24■□□□□ 0.67
CHMP5-201ENST00000223500 CLMNQ96JQ2 1002 aa19.24■□□□□ 0.67
CHMP5-201ENST00000223500 BAZ2BQ9UIF8 2168 aaKnown RBP19.24■□□□□ 0.67
CHMP5-201ENST00000223500 FRMPD2Q68DX3 1309 aaPredicted RBP19.24■□□□□ 0.67
CHMP5-201ENST00000223500 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 TRIM75PA6NK02 468 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 CTDNEP1O95476 244 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 GOLGA8HP0CJ92 632 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 SMARCA1P28370 1054 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 MTMR2Q13614 643 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 NTRK3Q16288 839 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 CST9Q5W186 159 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 STAG2Q8N3U4 1231 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 FAM184AQ8NB25 1140 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 GPCPD1Q9NPB8 672 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
CHMP5-201ENST00000223500 CXCL11O14625 94 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 JAK2O60674 1132 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 GJB2P29033 226 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 FSTL1Q12841 308 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 PPIL2Q13356 520 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 CCDC82Q8N4S0 544 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 SRBD1Q8N5C6 995 aaKnown RBP19.22■□□□□ 0.67
CHMP5-201ENST00000223500 OTUD5Q96G74 571 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 SLC26A6Q9BXS9 759 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 RBM27Q9P2N5 1060 aaKnown RBP19.22■□□□□ 0.67
CHMP5-201ENST00000223500 ORC3Q9UBD5 711 aaPredicted RBP19.22■□□□□ 0.67
CHMP5-201ENST00000223500 WDR46O15213 610 aaKnown RBP19.22■□□□□ 0.67
CHMP5-201ENST00000223500 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
CHMP5-201ENST00000223500 KCTD1Q719H9 257 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 CMTR1Q8N1G2 835 aaKnown RBP19.22■□□□□ 0.67
CHMP5-201ENST00000223500 WASF1Q92558 559 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 PHKBQ93100 1093 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 OPTNQ96CV9 577 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
CHMP5-201ENST00000223500 RNF26Q9BY78 433 aaPredicted RBP19.22■□□□□ 0.67
CHMP5-201ENST00000223500 STK36Q9NRP7 1315 aa19.21■□□□□ 0.67
CHMP5-201ENST00000223500 IKQ13123 557 aaPredicted RBP19.21■□□□□ 0.67
CHMP5-201ENST00000223500 RASGRP2Q7LDG7 609 aa19.21■□□□□ 0.67
CHMP5-201ENST00000223500 C12orf42Q96LP6 360 aa19.21■□□□□ 0.67
CHMP5-201ENST00000223500 SPZ1Q9BXG8 430 aa19.21■□□□□ 0.67
CHMP5-201ENST00000223500 PRPF3O43395 683 aaKnown RBP19.2■□□□□ 0.66
CHMP5-201ENST00000223500 PDCP20941 246 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 HMGCS2P54868 508 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 HUNKP57058 714 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 FUT2Q10981 343 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 SH3D19Q5HYK7 790 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 KIAA1755Q5JYT7 1200 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 FAM83BQ5T0W9 1011 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 NBPF11Q86T75 865 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 CHURC1Q8WUH1 139 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 CNKSR2Q8WXI2 1034 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
CHMP5-201ENST00000223500 EMILIN3Q9NT22 766 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 CNTNAP5Q8WYK1 1306 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 PTPRFP10586 1907 aa19.2■□□□□ 0.66
CHMP5-201ENST00000223500 TMEM232C9JQI7 657 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 IRF6O14896 467 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 DEXIO95424 95 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 PDIA4P13667 645 aaKnown RBP19.19■□□□□ 0.66
CHMP5-201ENST00000223500 STAT2P52630 851 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 FAM160B2Q86V87 743 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 UBA5Q9GZZ9 404 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 FEM1BQ9UK73 627 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 KCNH4Q9UQ05 1017 aa19.19■□□□□ 0.66
CHMP5-201ENST00000223500 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
CHMP5-201ENST00000223500 PLA2G6O60733 806 aa19.18■□□□□ 0.66
CHMP5-201ENST00000223500 PPFIA3O75145 1194 aa19.18■□□□□ 0.66
CHMP5-201ENST00000223500 TTBK2Q6IQ55 1244 aa19.18■□□□□ 0.66
CHMP5-201ENST00000223500 BTNL9Q6UXG8 535 aa19.18■□□□□ 0.66
CHMP5-201ENST00000223500 RRP36Q96EU6 259 aaKnown RBP19.18■□□□□ 0.66
CHMP5-201ENST00000223500 RIOX1Q9H6W3 641 aa19.18■□□□□ 0.66
CHMP5-201ENST00000223500 DTNBO60941 627 aa19.17■□□□□ 0.66
CHMP5-201ENST00000223500 VCAM1P19320 739 aa19.17■□□□□ 0.66
CHMP5-201ENST00000223500 SYDE2Q5VT97 1194 aa19.17■□□□□ 0.66
CHMP5-201ENST00000223500 WNK4Q96J92 1243 aa19.17■□□□□ 0.66
CHMP5-201ENST00000223500 VAT1LQ9HCJ6 419 aa19.17■□□□□ 0.66
CHMP5-201ENST00000223500 SEC63Q9UGP8 760 aaKnown RBP19.17■□□□□ 0.66
CHMP5-201ENST00000223500 A0A0G2JLL6 359 aaPredicted RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 TMEM88BA6NKF7 163 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 CYTH3O43739 400 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 FDPSP14324 419 aaKnown RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 SLC16A2P36021 539 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 SNAPC2Q13487 334 aa19.16■□□□□ 0.66
CHMP5-201ENST00000223500 LARP1BQ659C4 914 aaKnown RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 FASTKD5Q7L8L6 764 aaKnown RBP19.16■□□□□ 0.66
CHMP5-201ENST00000223500 PRRT2Q7Z6L0 340 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms