RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 RPAP3Q9H6T3 665 aaPredicted RBP27.71■■■□□ 2.03
HOMER3-201ENST00000221222 ZSWIM6Q9HCJ5 1215 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 PNMA3Q9UL41 463 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 RLFQ13129 1914 aa27.71■■■□□ 2.03
HOMER3-201ENST00000221222 SH2B2O14492 632 aaPredicted RBP27.7■■■□□ 2.02
HOMER3-201ENST00000221222 RAD21O60216 631 aa27.7■■■□□ 2.02
HOMER3-201ENST00000221222 CASTP20810 708 aaKnown RBP27.7■■■□□ 2.02
HOMER3-201ENST00000221222 RPS6KB1P23443 525 aa27.7■■■□□ 2.02
HOMER3-201ENST00000221222 CATSPERGQ6ZRH7 1159 aa27.7■■■□□ 2.02
HOMER3-201ENST00000221222 PNMA1Q8ND90 353 aa27.7■■■□□ 2.02
HOMER3-201ENST00000221222 UPF2Q9HAU5 1272 aaKnown RBP27.7■■■□□ 2.02
HOMER3-201ENST00000221222 LY9Q9HBG7 655 aa27.7■■■□□ 2.02
HOMER3-201ENST00000221222 LIFRP42702 1097 aa27.69■■■□□ 2.02
HOMER3-201ENST00000221222 TAF1CQ15572 869 aaPredicted RBP27.69■■■□□ 2.02
HOMER3-201ENST00000221222 PARK7Q99497 189 aaKnown RBP27.69■■■□□ 2.02
HOMER3-201ENST00000221222 ASCC2Q9H1I8 757 aaPredicted RBP27.69■■■□□ 2.02
HOMER3-201ENST00000221222 CPA1P15085 419 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 OSBPP22059 807 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 RBM25P49756 843 aaKnown RBP27.68■■■□□ 2.02
HOMER3-201ENST00000221222 FAM83BQ5T0W9 1011 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 RUFY3Q7L099 469 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 TMTC2Q8N394 836 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 DCAF4Q8WV16 495 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 C22orf23Q9BZE7 217 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 SENP2Q9HC62 589 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 GPHNQ9NQX3 736 aaPredicted RBP27.68■■■□□ 2.02
HOMER3-201ENST00000221222 HPS5Q9UPZ3 1129 aa27.68■■■□□ 2.02
HOMER3-201ENST00000221222 FKTNO75072 461 aa27.67■■■□□ 2.02
HOMER3-201ENST00000221222 SNHG28P0DPA3 235 aa27.67■■■□□ 2.02
HOMER3-201ENST00000221222 IRX3P78415 501 aaPredicted RBP27.67■■■□□ 2.02
HOMER3-201ENST00000221222 CRHR2Q13324 411 aa27.67■■■□□ 2.02
HOMER3-201ENST00000221222 FBXL16Q8N461 479 aa27.67■■■□□ 2.02
HOMER3-201ENST00000221222 LRRC2Q9BYS8 371 aa27.67■■■□□ 2.02
HOMER3-201ENST00000221222 TANGO6Q9C0B7 1094 aa27.67■■■□□ 2.02
HOMER3-201ENST00000221222 ZFYVE28Q9HCC9 887 aa27.67■■■□□ 2.02
HOMER3-201ENST00000221222 ADGRA2Q96PE1 1338 aa27.66■■■□□ 2.02
HOMER3-201ENST00000221222 CYP2C8P10632 490 aa27.66■■■□□ 2.02
HOMER3-201ENST00000221222 PDHBP11177 359 aa27.66■■■□□ 2.02
HOMER3-201ENST00000221222 BMP3P12645 472 aa27.66■■■□□ 2.02
HOMER3-201ENST00000221222 SLC1A4P43007 532 aa27.66■■■□□ 2.02
HOMER3-201ENST00000221222 TCEANC2Q96MN5 208 aa27.66■■■□□ 2.02
HOMER3-201ENST00000221222 NUP88Q99567 741 aaPredicted RBP27.66■■■□□ 2.02
HOMER3-201ENST00000221222 CYP46A1Q9Y6A2 500 aa27.66■■■□□ 2.02
HOMER3-201ENST00000221222 SGMS1Q86VZ5 419 aa27.65■■■□□ 2.02
HOMER3-201ENST00000221222 MYPNQ86TC9 1320 aa27.64■■■□□ 2.02
HOMER3-201ENST00000221222 NOM1Q5C9Z4 860 aaKnown RBP27.64■■■□□ 2.02
HOMER3-201ENST00000221222 RASGRP2Q7LDG7 609 aa27.64■■■□□ 2.02
HOMER3-201ENST00000221222 P2RX7Q99572 595 aaKnown RBP27.64■■■□□ 2.02
HOMER3-201ENST00000221222 AGXT2Q9BYV1 514 aa27.64■■■□□ 2.02
HOMER3-201ENST00000221222 A0A0G2JMZ2 1700 aa27.63■■■□□ 2.01
HOMER3-201ENST00000221222 TLR2O60603 784 aa27.63■■■□□ 2.01
HOMER3-201ENST00000221222 COG2Q14746 738 aa27.63■■■□□ 2.01
HOMER3-201ENST00000221222 UPF3BQ9BZI7 483 aaKnown RBP27.63■■■□□ 2.01
HOMER3-201ENST00000221222 FEM1BQ9UK73 627 aa27.63■■■□□ 2.01
HOMER3-201ENST00000221222 MTMR7Q9Y216 660 aa27.63■■■□□ 2.01
HOMER3-201ENST00000221222 PLA2G6O60733 806 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 FLOT1O75955 427 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 HERVK_113P62684 666 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 ZNF543Q08ER8 600 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 TROAPQ12815 778 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 PKN2Q16513 984 aaKnown RBP27.62■■■□□ 2.01
HOMER3-201ENST00000221222 LBX2Q6XYB7 198 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 Q6ZUG5 572 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 CATIPQ7Z7H3 387 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 SMCR8Q8TEV9 937 aaPredicted RBP27.62■■■□□ 2.01
HOMER3-201ENST00000221222 HOXC10Q9NYD6 342 aa27.62■■■□□ 2.01
HOMER3-201ENST00000221222 CCDC69A6NI79 296 aa27.61■■■□□ 2.01
HOMER3-201ENST00000221222 NFXL1Q6ZNB6 911 aa27.61■■■□□ 2.01
HOMER3-201ENST00000221222 ZNF654Q8IZM8 581 aa27.61■■■□□ 2.01
HOMER3-201ENST00000221222 GTF3C2Q8WUA4 911 aaPredicted RBP27.61■■■□□ 2.01
HOMER3-201ENST00000221222 TBC1D32Q96NH3 1257 aa27.61■■■□□ 2.01
HOMER3-201ENST00000221222 FBXO28Q9NVF7 368 aa27.61■■■□□ 2.01
HOMER3-201ENST00000221222 SPDYE16A6NNV3 312 aaPredicted RBP27.6■■■□□ 2.01
HOMER3-201ENST00000221222 DDAH1O94760 285 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 DSG3P32926 999 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 GCLCP48506 637 aaPredicted RBP27.6■■■□□ 2.01
HOMER3-201ENST00000221222 FGD1P98174 961 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 CCDC96Q2M329 555 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 GPATCH4Q5T3I0 446 aaKnown RBP27.6■■■□□ 2.01
HOMER3-201ENST00000221222 KCTD1Q719H9 257 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 MAP3K14Q99558 947 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 KIF2CQ99661 725 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 PPP1R9AQ9ULJ8 1098 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 TMEM232C9JQI7 657 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 STAT2P52630 851 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 ASPRV1Q53RT3 343 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 C17orf99Q6UX52 265 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 FAM160B2Q86V87 743 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 CHURC1Q8WUH1 139 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 CHMP4CQ96CF2 233 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 SLF1Q9BQI6 1058 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 ADAMTS5Q9UNA0 930 aa27.6■■■□□ 2.01
HOMER3-201ENST00000221222 FBXO46Q6PJ61 603 aaPredicted RBP27.59■■■□□ 2.01
HOMER3-201ENST00000221222 POTEEQ6S8J3 1075 aa27.59■■■□□ 2.01
HOMER3-201ENST00000221222 BTNL9Q6UXG8 535 aa27.59■■■□□ 2.01
HOMER3-201ENST00000221222 PRPF38AQ8NAV1 312 aaKnown RBP27.59■■■□□ 2.01
HOMER3-201ENST00000221222 ALDH8A1Q9H2A2 487 aaPredicted RBP27.59■■■□□ 2.01
HOMER3-201ENST00000221222 PDRG1Q9NUG6 133 aa27.59■■■□□ 2.01
HOMER3-201ENST00000221222 SLC12A7Q9Y666 1083 aa27.59■■■□□ 2.01
HOMER3-201ENST00000221222 COL11A1P12107 1806 aaPredicted RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms