RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TAF1P21675 1872 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 C4AP0C0L4 1744 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 C4BP0C0L5 1744 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 RTL9Q8NET4 1388 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 EIF3HO15372 352 aaKnown RBP eCLIP15.3■□□□□ 0.04
GABPB1-201ENST00000220429 SPATS2Q86XZ4 545 aaKnown RBP15.3■□□□□ 0.04
GABPB1-201ENST00000220429 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-201ENST00000220429 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
GABPB1-201ENST00000220429 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
GABPB1-201ENST00000220429 BATF3Q9NR55 127 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 ANAPC4Q9UJX5 808 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 GOLGA8BA8MQT2 603 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 TUBBP07437 444 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 CEBPZQ03701 1054 aaKnown RBP15.3■□□□□ 0.04
GABPB1-201ENST00000220429 ILDR1Q86SU0 546 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-201ENST00000220429 RAB11FIP4Q86YS3 637 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 MAGEC3Q8TD91 643 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 EHD4Q9H223 541 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 PYGLP06737 847 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 SETSIPP0DME0 302 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 MAGEA8P43361 318 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 TCP11Q8WWU5 503 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 CAPS2Q9BXY5 557 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 RPSAP08865 295 aaKnown RBP15.29■□□□□ 0.04
GABPB1-201ENST00000220429 IGHMBP2P38935 993 aaKnown RBP15.29■□□□□ 0.04
GABPB1-201ENST00000220429 PPFIA1Q13136 1202 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 MYSM1Q5VVJ2 828 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 CCDC50Q8IVM0 306 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 OR8K1Q8NGG5 319 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 RCOR1Q9UKL0 485 aa15.29■□□□□ 0.04
GABPB1-201ENST00000220429 A0A1B0GUL6 1792 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 ARHGAP6O43182 974 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 BCAMP50895 628 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 PIP4K2BP78356 416 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 CYB5R4Q7L1T6 521 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 RSRC1Q96IZ7 334 aaKnown RBP15.28■□□□□ 0.04
GABPB1-201ENST00000220429 IRX2Q9BZI1 471 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-201ENST00000220429 VCPKMTQ9H867 229 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 PES1O00541 588 aaKnown RBP15.28■□□□□ 0.04
GABPB1-201ENST00000220429 ABCD1P33897 745 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 PDE6BP35913 854 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 PLCB4Q15147 1175 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 SF3A1Q15459 793 aaKnown RBP15.28■□□□□ 0.04
GABPB1-201ENST00000220429 FILIP1LQ4L180 1135 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 LINC00116Q8NCU8 138 aa15.28■□□□□ 0.04
GABPB1-201ENST00000220429 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-201ENST00000220429 GRIN2DO15399 1336 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 ZNF202O95125 648 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 RTN3O95197 1032 aaPredicted RBP15.27■□□□□ 0.04
GABPB1-201ENST00000220429 PDHBP11177 359 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 CHRNDQ07001 517 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 MAP3K12Q12852 859 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
GABPB1-201ENST00000220429 DNAJC14Q6Y2X3 702 aaPredicted RBP15.27■□□□□ 0.04
GABPB1-201ENST00000220429 FBXW7Q969H0 707 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 SLC40A1Q9NP59 571 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 LMCD1Q9NZU5 365 aa15.27■□□□□ 0.04
GABPB1-201ENST00000220429 BCL9LQ86UU0 1499 aa15.27■□□□□ 0.03
GABPB1-201ENST00000220429 PPP1R12BO60237 982 aaPredicted RBP15.27■□□□□ 0.03
GABPB1-201ENST00000220429 MBD4O95243 580 aa15.27■□□□□ 0.03
GABPB1-201ENST00000220429 ALX1Q15699 326 aa15.27■□□□□ 0.03
GABPB1-201ENST00000220429 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.03
GABPB1-201ENST00000220429 RIN2Q8WYP3 895 aaPredicted RBP15.27■□□□□ 0.03
GABPB1-201ENST00000220429 KDM4CQ9H3R0 1056 aa15.27■□□□□ 0.03
GABPB1-201ENST00000220429 ZNF652Q9Y2D9 606 aa15.27■□□□□ 0.03
GABPB1-201ENST00000220429 NEDD4P46934 1319 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 ECEL1O95672 775 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 KCNQ4P56696 695 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 GNGT1P63211 74 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 E2F5Q15329 346 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 THEMIS2Q5TEJ8 643 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 YTHDF3Q7Z739 585 aaKnown RBP15.26■□□□□ 0.03
GABPB1-201ENST00000220429 PARP9Q8IXQ6 854 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 CDC23Q9UJX2 597 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 ANGEL1Q9UNK9 670 aaKnown RBP15.26■□□□□ 0.03
GABPB1-201ENST00000220429 GOLGA6CA6NDK9 693 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 B4E1Z4 1266 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 SH2B2O14492 632 aaPredicted RBP15.26■□□□□ 0.03
GABPB1-201ENST00000220429 GOLGA6DP0CG33 693 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 ARMT1Q9H993 441 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 GOLGA6AQ9NYA3 693 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 HPCAL4Q9UM19 191 aa15.26■□□□□ 0.03
GABPB1-201ENST00000220429 ZMYM6O95789 1325 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 NDUFAB1O14561 156 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 ATL3Q6DD88 541 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 CLEC4GQ6UXB4 293 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 MICALCLQ6ZW33 695 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 FAM228AQ86W67 206 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 IFNL3Q8IZI9 196 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 ZNF396Q96N95 335 aaPredicted RBP15.25■□□□□ 0.03
GABPB1-201ENST00000220429 SENP2Q9HC62 589 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 INCENPQ9NQS7 918 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms