RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 RRAGCQ9HB90 399 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 GJB4Q9NTQ9 266 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 FZD1Q9UP38 647 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 ATP6V1DQ9Y5K8 247 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 BAZ2BQ9UIF8 2168 aaKnown RBP18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 hCG_1642624A0A1W2PR95 340 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 NDUFB10O96000 172 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 TRIM29Q14134 588 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 ZKSCAN4Q969J2 545 aaPredicted RBP18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 CDCA5Q96FF9 252 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 UBA5Q9GZZ9 404 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 GOPCQ9HD26 462 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 GPCPD1Q9NPB8 672 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 DOCK1Q14185 1865 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 PPP1R12BO60237 982 aaPredicted RBP18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 BAG4O95429 457 aaKnown RBP18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 PFKFB3Q16875 520 aaPredicted RBP18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 KRT40Q6A162 431 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 KCTD1Q719H9 257 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 FERMT3Q86UX7 667 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.45■□□□□ 0.541e-8■□□□□ 11
SNRPD3-201ENST00000215829 GLIS2Q9BZE0 524 aaPredicted RBP18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 CPVLQ9H3G5 476 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 ZSCAN16Q9H4T2 348 aaPredicted RBP18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 RIOX1Q9H6W3 641 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 CLEC11AQ9Y240 323 aa18.45■□□□□ 0.54
SNRPD3-201ENST00000215829 SCG2P13521 617 aa18.44■□□□□ 0.54
SNRPD3-201ENST00000215829 NF2P35240 595 aa18.44■□□□□ 0.54
SNRPD3-201ENST00000215829 NFKBIBQ15653 356 aa18.44■□□□□ 0.54
SNRPD3-201ENST00000215829 NOL9Q5SY16 702 aaKnown RBP18.44■□□□□ 0.54
SNRPD3-201ENST00000215829 CCDC84Q86UT8 332 aaPredicted RBP18.44■□□□□ 0.54
SNRPD3-201ENST00000215829 PICK1Q9NRD5 415 aa18.44■□□□□ 0.54
SNRPD3-201ENST00000215829 POTEIP0CG38 1075 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 POTEJP0CG39 1038 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 XBP1P17861 261 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 PTPRAP18433 802 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 RESTQ13127 1097 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 PRKG1Q13976 671 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 TTBK2Q6IQ55 1244 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 PIBF1Q8WXW3 757 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 VCPKMTQ9H867 229 aa18.43■□□□□ 0.54
SNRPD3-201ENST00000215829 BMP3P12645 472 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 KIAA1755Q5JYT7 1200 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 MCTP1Q6DN14 999 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 RRP36Q96EU6 259 aaKnown RBP18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 WDR18Q9BV38 432 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 VAT1LQ9HCJ6 419 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 ADGRF4Q8IZF3 695 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 FEZ1Q99689 392 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 KIAA1683Q9H0B3 1180 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 AS3MTQ9HBK9 375 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 VPS54Q9P1Q0 977 aa18.42■□□□□ 0.54
SNRPD3-201ENST00000215829 MMP1P03956 469 aa18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 MCM4P33991 863 aa18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 SLC16A2P36021 539 aa18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 IREB2P48200 963 aaKnown RBP18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 FOXD4L6Q3SYB3 417 aaPredicted RBP18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 FOXD4L3Q6VB84 417 aaPredicted RBP18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 SHISA4Q96DD7 197 aa18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 NUP88Q99567 741 aaPredicted RBP18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
SNRPD3-201ENST00000215829 USP17L10C9JJH3 530 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 KIF23Q02241 960 aaPredicted RBP18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 ZYXQ15942 572 aaKnown RBP18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 MAP1SQ66K74 1059 aaPredicted RBP18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 CHAMP1Q96JM3 812 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 PIGSQ96S52 555 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 PHF20Q9BVI0 1012 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 JMJD4Q9H9V9 463 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 SH3GLB2Q9NR46 395 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 SEC63Q9UGP8 760 aaKnown RBP18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 KCNJ14Q9UNX9 436 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 TMEM232C9JQI7 657 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 SAFBQ15424 915 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 BTNL9Q6UXG8 535 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 LDHDQ86WU2 507 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 HOMER1Q86YM7 354 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 ZNF280CQ8ND82 737 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 MTMR8Q96EF0 704 aa18.4■□□□□ 0.54
SNRPD3-201ENST00000215829 SPP2Q13103 211 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 VGLL4Q14135 290 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 MAP3K11Q16584 847 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 FAM177A1Q8N128 213 aaPredicted RBP18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 LPAR1Q92633 364 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 NMRK2Q9NPI5 230 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 BARHL2Q9NY43 387 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 SNCAIPQ9Y6H5 919 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 ZHX2Q9Y6X8 837 aa18.39■□□□□ 0.53
SNRPD3-201ENST00000215829 U2AF2P26368 475 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNRPD3-201ENST00000215829 USP14P54578 494 aa18.38■□□□□ 0.53
SNRPD3-201ENST00000215829 BACE1P56817 501 aa18.38■□□□□ 0.53
SNRPD3-201ENST00000215829 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
SNRPD3-201ENST00000215829 FAM83BQ5T0W9 1011 aa18.38■□□□□ 0.53
SNRPD3-201ENST00000215829 WWC2Q6AWC2 1192 aa18.38■□□□□ 0.53
SNRPD3-201ENST00000215829 FAM173BQ6P4H8 233 aa18.38■□□□□ 0.53
SNRPD3-201ENST00000215829 BRAPQ7Z569 592 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms