RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Pla2g4eQ50L42 875 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Dlg1Q811D0 905 aaKnown RBP17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Kctd3Q8BFX3 815 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Rec8Q8C5S7 591 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Tmem60Q8K174 133 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Tomm22Q9CPQ3 142 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Lmbr1Q9JIT0 490 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Rcan3Q9JKK0 239 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Kcnh3Q9WVJ0 1095 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Homer1Q9Z2Y3 366 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 NinQ61043 2035 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Fam205a1D3YZF6 1314 aa17.85■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Cyp2c69E9PXC3 491 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Grin1P35438 938 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Cyp2c40P56657 491 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Eif5P59325 429 aaKnown RBP17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Kiaa1468Q148V7 1216 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 D630036H23RikQ3UQD6 204 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Tshz1Q5DTH5 1084 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Arhgef2Q60875 985 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Slc9c1Q6UJY2 1175 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Znf653Q6YND2 615 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Olfr119Q7TRJ5 321 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Larp6Q8BN59 492 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Trim29Q8R2Q0 587 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Apobec3Q99J72 440 aaKnown RBP17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 ArcQ9WV31 396 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Kcnq2Q9Z351 759 aa17.84■□□□□ 0.45
Ubp1-206ENSMUST00000216558 A0A0U1RNP2 1173 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Ttbk2Q3UVR3 1243 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Prpf4bQ61136 1007 aaKnown RBP17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Olfml1Q8BSH2 233 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Lrrd1Q8C0R9 853 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Vps53Q8CCB4 832 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Inpp5bQ8K337 993 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Nod2Q8K3Z0 1020 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Tesk2Q8VCT9 570 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Utp3Q9JI13 469 aaKnown RBP17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Nr2e3Q9QXZ7 395 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Sel1lQ9Z2G6 790 aa17.83■□□□□ 0.45
Ubp1-206ENSMUST00000216558 Tbc1d2B1AVH7 922 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Stx1aO35526 288 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Klrg2Q3UM83 387 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Cnnm4Q69ZF7 771 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Csrnp2Q8BGQ2 534 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Gpsm2Q8VDU0 679 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Gmcl1Q920G9 524 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Iqca1Q9CUL5 857 aa17.83■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Sycp2lA0A0M3U1B0 842 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Mx1P09922 631 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Sap30bpQ02614 308 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Kctd1Q5M956 257 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Swap70Q6A028 585 aaKnown RBP17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Polr3gQ6NXY9 223 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Clec16aQ80U30 1036 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Tmem39bQ810L4 492 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Ms4a5Q810P8 197 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Hirip3Q8BLH7 601 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Trex1Q91XB0 314 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Nlrp5Q9R1M5 1163 aa17.82■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Zkscan7E9PVW1 718 aa17.81■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Tmem132bF7BAB2 1078 aa17.81■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Hmx1O70218 332 aa17.81■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Gtf2f1Q3THK3 508 aaKnown RBP17.81■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Lgr6Q3UVD5 967 aa17.81■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Eid1Q9DCR4 169 aa17.81■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Usp31E9Q6Y8 1344 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Atp8b5A3FIN4 1183 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Clrn2B2RVW2 232 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Zscan25B2RX31 543 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 NyxP83503 476 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 GmpsQ3THK7 693 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Akap4Q60662 849 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Rasa3Q60790 834 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Cep85Q8BMK0 761 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Armc6Q8BNU0 468 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Onecut3Q8K557 490 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Hs2st1Q8R3H7 356 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Mrps25Q9D125 171 aaKnown RBP17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Phf14Q9D4H9 881 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Ppil2Q9D787 521 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Txnrd2Q9JLT4 524 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Acot3Q9QYR7 432 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Ccdc173A0JLY1 547 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Cdh15P33146 784 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Gas2l3Q3UWW6 683 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 C87499Q3UX49 493 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Ift122Q6NWV3 1182 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Snapc2Q91XA5 359 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Mettl16Q9CQG2 553 aaKnown RBP17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 GrapQ9CX99 217 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Stxbp4Q9WV89 557 aa17.8■□□□□ 0.44
Ubp1-206ENSMUST00000216558 SynrgQ5SV85 1306 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Acad12D3Z7X0 555 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Zscan29E9Q5B4 869 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 SsbP32067 415 aaKnown RBP17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Tnni3kQ5GIG6 834 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Tom1l2Q5SRX1 507 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Gga3Q8BMI3 718 aa17.79■□□□□ 0.44
Ubp1-206ENSMUST00000216558 Scfd2Q8BTY8 684 aa17.79■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms