RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Sap130Q8BIH0 1057 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Col23a1Q8K4G2 532 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Ddit3P35639 168 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Glis3Q6XP49 780 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gpsm2Q8VDU0 679 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Ppp2r5dQ91V89 594 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Tubgcp2Q921G8 905 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 NkapQ9D0F4 415 aaKnown RBP11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Cfap53Q9D439 514 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 D830030K20RikE9PYQ5 218 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gm3043K7N693 218 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gm16440K7N6G6 218 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gm2244L7N2A3 218 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gm3278L7N2D2 218 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gm8271L7N2E2 218 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Tgfb2P27090 414 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Rbm12b2Q66JV4 834 aaKnown RBP11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Usp37Q8C0R0 979 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Tab2Q99K90 693 aa11.68□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Tdo2P48776 406 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Sfi1Q3UZY0 1216 aaKnown RBP11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Rasa3Q60790 834 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Cyp7b1Q60991 507 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Anp32cQ64G17 123 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Hdac4Q6NZM9 1076 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Lca5Q80ST9 704 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gm10378F6XQQ1 160 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Ankrd40Q5SUE8 363 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Slc9c1Q6UJY2 1175 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Tmc4Q7TQ65 694 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Pdlim2Q8R1G6 349 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Mtmr4Q91XS1 1190 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Hic2Q9JLZ6 619 aaKnown RBP11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Zfp853A0A1D5RM95 733 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Prss40A6H6T1 365 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Spocd1B1ASB6 936 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Zscan25B2RX31 543 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Pus7B7ZNL8 666 aaKnown RBP11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Gm5934D3Z4U6 212 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Lins1Q3U1D0 764 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Nsrp1Q5NCR9 542 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Slc9a1Q61165 820 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Kif17Q99PW8 1038 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 PpardP35396 440 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Ano6Q6P9J9 911 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 PigsQ6PD26 555 aaKnown RBP11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Ctdspl2Q8BG15 465 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Q9DAQ4 598 aa11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Usp14Q9JMA1 493 aaKnown RBP11.67□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Nfxl1E9Q8I7 918 aaKnown RBP11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Mtfr1lQ9CWE0 289 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Add3Q9QYB5 706 aaKnown RBP11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Acot3Q9QYR7 432 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Pcdha4O88689 947 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Igbp1Q61249 340 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 TxlnaQ6PAM1 554 aaKnown RBP11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Rexo1Q7TT28 1213 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Sdccag8Q80UF4 717 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Pym1Q8CHP5 203 aaKnown RBP11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 GlyctkQ8QZY2 523 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Znrd1-asQ8R0E5 213 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Hps3Q91VB4 1002 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Mad2l2Q9D752 211 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Cnpy2Q9QXT0 182 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Abcb4P21440 1276 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Jade2Q6ZQF7 829 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Sh3d21Q7TSG5 549 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Slc13a4Q8BZ82 625 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Commd10Q8JZY2 202 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Plekhg6Q8R0J1 787 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Stk32bQ9JJX8 414 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Slurp2P0DP59 97 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Sept2P42208 361 aaKnown RBP11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 C87499Q3UX49 493 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Spata21Q8BHW6 681 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Pex3Q9QXY9 372 aa11.66□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Klhl34A2AI76 644 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Magea6O89010 325 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Nap1l1P28656 391 aaKnown RBP11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Pafah1b1P63005 410 aaKnown RBP11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Sec23aQ01405 765 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Nell2Q61220 819 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Cyp4x1Q6A152 507 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Churc1Q6DG52 112 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Fam196bQ6GQV1 535 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Magea3Q6T340 320 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Apbb1ipQ8R5A3 670 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Krt34Q9D646 392 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Stag2O35638 1231 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 DaglaQ6WQJ1 1044 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Clic6Q8BHB9 596 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Uso1Q9Z1Z0 959 aaKnown RBP11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Thrap3Q569Z6 951 aaKnown RBP11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Exoc3Q6KAR6 755 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Cyp4f39Q8BGU0 532 aa11.65□□□□□ -0.54
Ldb3-205ENSMUST00000090040 Phldb3E9QAF4 648 aa11.65□□□□□ -0.55
Ldb3-205ENSMUST00000090040 Tph1P17532 447 aa11.65□□□□□ -0.55
Ldb3-205ENSMUST00000090040 PsdQ5DTT2 1024 aa11.65□□□□□ -0.55
Ldb3-205ENSMUST00000090040 Mcm7Q61881 719 aaKnown RBP11.65□□□□□ -0.55
Ldb3-205ENSMUST00000090040 Snw1Q9CSN1 536 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms