RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Parp2O88554 559 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Kif5aP33175 1027 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Alox15P39654 663 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pth1rP41593 591 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 LyarQ08288 388 aaKnown RBP10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Agbl1Q09M05 972 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Mks1Q5SW45 561 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccdc82Q6PG04 518 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Taf5lQ91WQ5 589 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tmem98Q91X86 226 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Dbndd2Q9CRD4 158 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fam133bQ9CVI2 245 aaKnown RBP10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cfap53Q9D439 514 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fam217aQ9D9W6 419 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Capn15Q9JLG8 1095 aa10.81□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cfap99A0A140LIX9 648 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ier5O89113 308 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Myl1P05977 188 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Wfs1P56695 890 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Acsbg2Q2XU92 667 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gm28047Q3US59 414 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Man2a2Q8BRK9 1152 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pak2Q8CIN4 524 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Nudt13Q8JZU0 352 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gimap7Q8R379 293 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 IncenpQ9WU62 880 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 PtprtQ99M80 1454 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 AceP09470 1312 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Apba1B2RUJ5 842 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ano9P86044 747 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Skap2Q3UND0 358 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Nop9Q8BMC4 636 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tango6Q8C3S2 1079 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pcdhb4Q91XZ6 784 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tmco1Q921L3 188 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cdk9Q99J95 372 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ddx47Q9CWX9 455 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gemin5Q8BX17 1502 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Lrriq4A6H6A4 596 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Chmp6P0C0A3 200 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 RaraP11416 462 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Hcls1P49710 486 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fam207aP58468 219 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Q3V0E1 1183 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Fam228bQ497Q6 232 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Abl2Q4JIM5 1182 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Spag7Q7TNE3 227 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Batf3Q9D275 118 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gdap2Q9DBL2 498 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ankrd2Q9WV06 328 aa10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Uso1Q9Z1Z0 959 aaKnown RBP10.8□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gm1979E9QAN3 267 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 MybP06876 636 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Smyd1P97443 490 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Zscan26Q5RJ54 466 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ezh2Q61188 746 aaKnown RBP10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Klhdc10Q6PAR0 439 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Sestd1Q80UK0 696 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 C2cd2lQ80X80 706 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Vwa5aQ99KC8 793 aaKnown RBP10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 LrmdaQ9D9B4 229 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Dmap1Q9JI44 468 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Abt1Q9QYL7 269 aaKnown RBP10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pde3aQ9Z0X4 1141 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Abca6Q8K441 1624 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Kidins220E9Q9B7 1793 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 MipepA6H611 711 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Akr1b10G5E895 316 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 EnahQ03173 802 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Luc7l2Q7TNC4 392 aaKnown RBP10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cnot10Q8BH15 744 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Psma8Q9CWH6 250 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Myo1hQ9D6A1 958 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 MrgbpQ9DAT2 204 aa10.79□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Uhrf1bp1lA2RSJ4 1457 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Cul4bA2A432 970 aaKnown RBP10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Zfp651E9PZ11 729 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Pax3P24610 479 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 GckP52792 465 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccdc127Q3TC33 260 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 TraddQ3U0V2 310 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Yipf3Q3UDR8 347 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gsdma3Q5Y4Y6 464 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 XiapQ60989 496 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Swap70Q6A028 585 aaKnown RBP10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 HomezQ80W88 542 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccdc92Q8VDN4 314 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 SelenooQ9DBC0 667 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Acot9Q9R0X4 439 aaKnown RBP10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Myo5bP21271 1818 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Col22a1E9Q7P1 1613 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ccng2O08918 344 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Zfyve27Q3TXX3 415 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Gas2l3Q3UWW6 683 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ift88Q61371 824 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Tekt3Q6X6Z7 490 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Ankib1Q6ZPS6 1085 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 F13a1Q8BH61 732 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Anks1bQ8BIZ1 1259 aa10.78□□□□□ -0.68
Hmgb1-201ENSMUST00000085546 Rsph6aQ8CDR2 708 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms