RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Iqca1Q9CUL5 857 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 TnmdQ9EP64 317 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Myh14Q6URW6 2000 aa9.98□□□□□ -0.81
Trim39-201ENSMUST00000042717 Fam205a1D3YZF6 1314 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Dnajb6O54946 365 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Grin1P35438 938 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 PigsQ6PD26 555 aaKnown RBP9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Dusp9Q7TNL7 452 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Slc18a1Q8R090 521 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Lzts2Q91YU6 671 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Tmod2Q9JKK7 351 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Psmd10Q9Z2X2 231 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Cfap58B2RW38 873 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Rhpn1Q61085 643 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Lca5Q80ST9 704 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Hook1Q8BIL5 728 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Rasgrp4Q8BTM9 673 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Nat10Q8K224 1024 aaKnown RBP9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 Trim11Q99PQ2 467 aa9.97□□□□□ -0.81
Trim39-201ENSMUST00000042717 NinQ61043 2035 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Nme9A0A1L1SUL6 329 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Tmem132bF7BAB2 1078 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gm21969J3QJZ1 289 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ampd3O08739 766 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 CtshP49935 333 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gas2l3Q3UWW6 683 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Gm11437Q5QR91 290 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Ift122Q6NWV3 1182 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Zfp341Q6PGC9 846 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Phf20Q8BLG0 1010 aaKnown RBP9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Rec8Q8C5S7 591 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Riox2Q8CD15 465 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Arhgef6Q8K4I3 771 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Dpp7Q9ET22 506 aa9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Hic2Q9JLZ6 619 aaKnown RBP9.96□□□□□ -0.81
Trim39-201ENSMUST00000042717 Lrch1P62046 709 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tspyl4Q8VD63 406 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gtf2a1Q99PM3 378 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 NenfQ9CQ45 171 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Yeats4Q9CR11 227 aaKnown RBP9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 TicrrQ8BQ33 1889 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Fgl2P12804 432 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Bace1P56818 501 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Sema3eP70275 775 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cyp7b1Q60991 507 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Slc9a1Q61165 820 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Slc9c1Q6UJY2 1175 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Smc2Q8CG48 1191 aaKnown RBP9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 SltmQ8CH25 1031 aaKnown RBP9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Kiaa1024Q8K3V7 917 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tdrd3Q91W18 743 aaKnown RBP9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gbp7Q91Z40 638 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Nr2e3Q9QXZ7 395 aa9.96□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cyp26c1B2RXA7 518 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Dnaaf5B9EJR8 853 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Zscan29E9Q5B4 869 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Il4rP16382 810 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gdf10P97737 476 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gprin1Q3UNH4 932 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Vmn1r209Q5NC97 312 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Kiaa1524Q8BWY9 907 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tmem60Q8K174 133 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Pcdhb15Q91Y04 786 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tmem191cQ9JJB1 302 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 PdcQ9QW08 244 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 SmapQ9R0P4 181 aaKnown RBP9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 B3galt4Q9Z0F0 371 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Pitpnm2Q6ZPQ6 1335 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Wdr33Q8K4P0 1330 aaKnown RBP9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 PparaP23204 468 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Kif3aP28741 701 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 LeprP48356 1162 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Mmp20P57748 482 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Zc3h15Q3TIV5 426 aaKnown RBP9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Sfi1Q3UZY0 1216 aaKnown RBP9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Jakmip3Q5DTN8 844 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Pcdhb14Q6PB90 796 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Fbxo28Q8BIG4 368 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tcp11l1Q8BTG3 509 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Trim29Q8R2Q0 587 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Bst2Q8R2Q8 172 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 4921524L21RikQ9D5T2 438 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Myo1hQ9D6A1 958 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Inpp4aQ9EPW0 939 aa9.95□□□□□ -0.82
Trim39-201ENSMUST00000042717 Api5O35841 504 aaKnown RBP9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Pfkfb1P70266 471 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Zfp953Q3UPV7 304 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Thrap3Q569Z6 951 aaKnown RBP9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Swap70Q6A028 585 aaKnown RBP9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Haus7Q8BKT8 364 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Yars2Q8BYL4 472 aaKnown RBP9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Defb15Q8R2I5 79 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gpsm2Q8VDU0 679 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 AllcQ9JHX6 414 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ankrd35E9Q9D8 996 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Fbln1Q08879 705 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tmprss11eQ5S248 423 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Prl2c1Q5SVL9 228 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Snx13Q6PHS6 957 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Dlg1Q811D0 905 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms