RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Pcdha7Q91Y13 937 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Cfap45Q9D9U9 551 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Clstn1Q9EPL2 979 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Ces3aQ63880 571 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Ildr1Q8CBR1 537 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Ces3bQ8VCU1 571 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Abhd2Q9QXM0 425 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Vstm4T1NXB5 319 aa14.39□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Palm3A2TJV2 734 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 GpiP06745 558 aaKnown RBP14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Smarca1Q6PGB8 1046 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Fam161bQ8CB59 589 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 MypopQ8R4U1 393 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Q91WD4 421 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Pcdha12Q91Y18 950 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Rbm5Q91YE7 815 aaKnown RBP14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Klhl40Q9D783 621 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Rai14Q9EP71 979 aaKnown RBP14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Jag1Q9QXX0 1218 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 TicrrQ8BQ33 1889 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 DnttP09838 530 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Kcna1P16388 495 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 H2afxP27661 143 aaKnown RBP14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Aggf1Q7TN31 711 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Dusp9Q7TNL7 452 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Setdb2Q8C267 713 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Rbm19Q8R3C6 952 aaKnown RBP14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Washc1Q8VDD8 475 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 ChmQ9QXG2 665 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Nr2e3Q9QXZ7 395 aa14.38□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Sema3fO88632 785 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Eif5P59325 429 aaKnown RBP14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Nsrp1Q5NCR9 542 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Tmx1Q8VBT0 278 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Lzts2Q91YU6 671 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Uchl5Q9WUP7 329 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Herc3A6H6S0 1050 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Nfil3O08750 462 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 AsnsQ61024 561 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Dlg1Q811D0 905 aaKnown RBP14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Apol10aQ8CCA5 318 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Cdk8Q8R3L8 464 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Eps8l1Q8R5F8 716 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 UvssaQ9D479 717 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Zkscan5Q9Z1D8 819 aa14.37□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Rsph10bE9PYQ0 876 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Tmem132bF7BAB2 1078 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Sema6bO54951 886 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Ess2O70279 479 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Gucy2cQ3UWA6 1072 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Mdh1bQ5F204 500 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 RragbQ6NTA4 374 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Necab1Q8BG18 352 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Ccdc38Q8CDN8 563 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Mfap3lQ9D3X9 409 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Mss51Q9D5Z5 446 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Mtmr9Q9Z2D0 545 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Cntnap1O54991 1385 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 MthfslL7N466 203 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Pak1O88643 545 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Mboat4P0C7A3 435 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Traf1P39428 409 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Eya3P97480 510 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Pcsk7Q61139 770 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Grm4Q68EF4 912 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Desi2Q9D291 194 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Arl6ip4Q9JM93 229 aa14.36□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Alppl2P24823 529 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 VrtnQ3SYK4 740 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Psg29Q3URN6 468 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 NelfbQ8C4Y3 580 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Tada3Q8R0L9 432 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Fam76aQ922G2 307 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 SelenooQ9DBC0 667 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Pcdh11xF6ZNL5 1338 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Pabpc1lA2A5N3 607 aaKnown RBP14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Zscan18E9PUD6 809 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Krt78E9Q0F0 1068 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Atp6v0a2P15920 856 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 EgfrQ01279 1210 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Kcnb1Q03717 857 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 DaglaQ6WQJ1 1044 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Fbxo18Q8K2I9 1042 aa14.35□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Arid4aF8VPQ2 1261 aaKnown RBP14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Slc39a2G3X943 309 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Nr1i2O54915 431 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Gcnt1Q09324 428 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Best3Q6H1V1 669 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Vps18Q8R307 973 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Tube1Q9D6T1 475 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Tfap4Q9JIZ5 338 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Zfand4D3Z3C6 739 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Gm4307E9PZY4 289 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Gm4312K9J7E2 289 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Tacc1Q6Y685 774 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Lca5Q80ST9 704 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Ppp2r5dQ91V89 594 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Hps4Q99KG7 671 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 Alpk1Q9CXB8 1231 aa14.34□□□□□ -0.11
Rnf4-201ENSMUST00000030992 4930548H24RikQ9D496 437 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms