RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Naa16Q9DBB4 864 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Tdo2P48776 406 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Cdcp1Q5U462 833 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Polr2dQ9D7M8 142 aaKnown RBP18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Caprin2Q05A80 1031 aaKnown RBP18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Trpa1Q8BLA8 1125 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Fermt3Q8K1B8 665 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Clcn6O35454 870 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Myo1aO88329 1043 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Pak1O88643 545 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Ginm1Q91WR6 327 aa18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Add3Q9QYB5 706 aaKnown RBP18.42■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Mapkapk5O54992 473 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Ano9P86044 747 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Atp8a2P98200 1148 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Nlrp1aQ2LKU9 1182 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Slc10a4Q3UEZ8 437 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Nek9Q8K1R7 984 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Ccpg1Q640L3 753 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Fbln2P37889 1221 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Cetn1P41209 172 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Prpf38aQ4FK66 312 aaKnown RBP18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Mdh1bQ5F204 500 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 HdlbpQ8VDJ3 1268 aaKnown RBP18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Vps36Q91XD6 386 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Gm30191A0A0U1RNT7 187 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 A0A1W2P7S8 802 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Pdha1P35486 390 aaKnown RBP18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Stmn1P54227 149 aaKnown RBP18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Gm136Q3V037 328 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Mcm7Q61881 719 aaKnown RBP18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Cdc5lQ6A068 802 aaKnown RBP18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Epc1Q8C9X6 813 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Rabep2Q91WG2 554 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Cul3Q9JLV5 768 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 S100bP50114 92 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 CtcfQ61164 736 aaKnown RBP18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 E330017A01RikQ8BU47 192 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Wdr60Q8C761 999 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Xrcc4Q924T3 326 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Smc6Q924W5 1097 aa18.41■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Rtl9Q32KG4 1339 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Csrnp1P59054 583 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Ncoa5Q91W39 579 aaKnown RBP18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Ttc14Q9CSP9 761 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Efhd1Q9D4J1 240 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 A630010A05RikA9C473 232 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Ftl2P49945 183 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Map3k7Q62073 579 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Map2k2Q63932 401 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Kcnj14Q8JZN3 434 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Calr3Q9D9Q6 380 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Cd274Q9EP73 290 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Psma7Q9Z2U0 248 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Trim80Q3V061 624 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Arid5bQ8BM75 1188 aaKnown RBP18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Trpc3Q9QZC1 836 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Naif1Q6PFD7 327 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Trim42Q9D2H5 723 aa18.4■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Taf4bG5E8Z2 855 aa18.39■□□□□ 0.54
Col17a1-201ENSMUST00000026045 PigbQ9JJQ0 542 aa18.39■□□□□ 0.54
Col17a1-201ENSMUST00000026045 Gm2030D3Z7C4 212 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 XpcP51612 930 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 G3bp2P97379 482 aaKnown RBP18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Atp11aP98197 1187 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Mkrn3Q60764 544 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 CtifQ6PEE2 600 aaKnown RBP18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Trim17Q7TPM3 477 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Mterf4Q8BVN4 346 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Foxo3Q9WVH4 672 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Znf394Q9Z1D9 521 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Rnf17Q99MV7 1640 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Palm3A2TJV2 734 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Nfil3O08750 462 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Depdc5P61460 1591 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 SpertQ32MG2 446 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Hexim1Q8R409 356 aaKnown RBP18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Fgd4Q91ZT5 766 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 RtcbQ99LF4 505 aaKnown RBP18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Coro7Q9D2V7 922 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Nfe2l3Q9WTM4 660 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Gdap1O88741 358 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Senp1P59110 640 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Cep152A2AUM9 1736 aaKnown RBP18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Gm5936A2BG95 728 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Gm5640A3KG49 728 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Ncoa4Q5U4H9 625 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Dnajc14Q921R4 703 aa18.39■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Eme2Q56A04 373 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Cyp24a1Q64441 514 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Zbtb40Q6PCS8 1258 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Ints4Q8CIM8 964 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Nde1Q9CZA6 344 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Hnrnph1O35737 449 aaKnown RBP18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Daam2Q80U19 1115 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 ParnQ8VDG3 624 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 PparaP23204 468 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Nub1P54729 614 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 InsrrQ9WTL4 1300 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Cul4bA2A432 970 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms