RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 Q66JV7 365 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 HibchQ8QZS1 385 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Mrpl11Q9CQF0 192 aaKnown RBP11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 NapgQ9CWZ7 312 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Dusp10Q9ESS0 483 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Atp6v1g2Q9WTT4 118 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Proca1B0QZF7 307 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Gcom1E9PZ54 550 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Kif5aP33175 1027 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Shox2P70390 331 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Stim2P83093 746 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Top1Q04750 767 aaKnown RBP11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 MyzapQ3UIJ9 466 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Kif5bQ61768 963 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ero1aQ8R180 464 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Telo2Q9DC40 840 aaKnown RBP11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Sil1Q9EPK6 465 aa11.05□□□□□ -0.64
Chd1-201ENSMUST00000024620 Kiaa0232Q80U59 1396 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Cul4bA2A432 970 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Arhgef10lA2AWP8 1280 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ccdc144bE9PVZ3 520 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Speer2E9Q9U2 264 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Sclt1G5E861 688 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Slc27a2O35488 620 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 AfpP02772 605 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 SagP20443 403 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 S100bP50114 92 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 S100a5P63084 93 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Specc1Q5SXY1 1067 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Lamb3Q61087 1168 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 NostrinQ6WKZ7 506 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 BoraQ8BS90 525 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Cep55Q8BT07 462 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Dnm1lQ8K1M6 742 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Pof1bQ8K4L4 587 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Cd248Q91V98 765 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Rad18Q9QXK2 509 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Maged1Q9QYH6 775 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Atp12aQ9Z1W8 1035 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 MaddQ80U28 1577 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Vmn2r78K7N6U5 853 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Atp2a2O55143 1044 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 TaglnP37804 201 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Sept2P42208 361 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Usp48Q3V0C5 1052 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Daam2Q80U19 1115 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Katnal1Q8K0T4 488 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ndst4Q9EQW8 872 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ifit1bl1D3Z6F0 470 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 PbsnO08976 174 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Xirp1O70373 1129 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Pkn1P70268 946 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Asap3Q5U464 904 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Itga6Q61739 1091 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Tti2Q8BGV4 512 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Mkl1Q8K4J6 964 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Gspt1Q8R050 636 aaKnown RBP11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Pcdhb15Q91Y04 786 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Spdl1Q923A2 608 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Erc1Q99MI1 1120 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Tuba8Q9JJZ2 449 aa11.04□□□□□ -0.64
Chd1-201ENSMUST00000024620 Pitpnm2Q6ZPQ6 1335 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Kcnb2A6H8H5 907 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Mfsd4b4J3QNS5 503 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Dync1i2O88487 612 aaKnown RBP11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Apaf1O88879 1249 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Rad23aP54726 363 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Smarcad1Q04692 1021 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 GmncQ3URY2 333 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Trim80Q3V061 624 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Xlr3bQ6P205 226 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ttc7aQ8BGB2 858 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Gpatch3Q8BIY1 525 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Havcr2Q8VIM0 281 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Tubgcp4Q9D4F8 667 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ndufa13Q9ERS2 144 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Pabpc1lA2A5N3 607 aaKnown RBP11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Kiaa1522A2A7S8 1013 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ag2Q3UPL5 249 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Znf652Q5DU09 608 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Stip1Q60864 543 aaKnown RBP11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 JrkQ60976 557 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Nlrp9cQ66X01 1004 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Tmcc1Q69ZZ6 649 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Sez6lQ6P1D5 963 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Me3Q8BMF3 604 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Frs2Q8C180 508 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Champ1Q8K327 802 aaKnown RBP11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 GptQ8QZR5 496 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Vps37cQ8R105 352 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Trim8Q99PJ2 551 aa11.03□□□□□ -0.64
Chd1-201ENSMUST00000024620 Caskin1Q6P9K8 1431 aa11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ces1hD3Z298 562 aa11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Spata31E9QAF0 1014 aa11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Abcd1P48410 736 aa11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Adck2Q6NSR3 617 aa11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Prpf38bQ80SY5 542 aaKnown RBP11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Ppp1r37Q8BKR5 712 aa11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Abcg4Q91WA9 646 aa11.02□□□□□ -0.64
Chd1-201ENSMUST00000024620 Fam192aQ91WE2 254 aa11.02□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms