RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Matr3Q8K310 846 aaKnown RBP12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 LpxnQ99N69 386 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Sik3Q6P4S6 1311 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Otud7bB2RUR8 840 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cyp3a59D3Z2W7 503 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Zscan18E9PUD6 809 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Snai1Q02085 264 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Top1Q04750 767 aaKnown RBP12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Sdad1Q80UZ2 687 aaKnown RBP12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Fam102bQ8BQS4 339 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Tbc1d23Q8K0F1 684 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Rnf34Q99KR6 376 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 1700018F24RikB2RW27 314 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 LdhaP06151 332 aaKnown RBP12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 HmmrQ00547 794 aaKnown RBP12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Tsg101Q61187 391 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Erlin2Q8BFZ9 340 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Myoz2Q9JJW5 264 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Tmod2Q9JKK7 351 aa12.14□□□□□ -0.47
Msh3-201ENSMUST00000022220 Hmgb2P30681 210 aaKnown RBP12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Tmtc2Q56A06 836 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Tom1l2Q5SRX1 507 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Slc18a1Q8R090 521 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Azi2Q9QYP6 405 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 GakQ99KY4 1305 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Clrn2B2RVW2 232 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ice2Q3UZ18 988 aaKnown RBP12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Mum1l1Q4VA55 681 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 AsnsQ61024 561 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Igbp1Q61249 340 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ube3cQ80U95 1083 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Csrnp2Q8BGQ2 534 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Afg3l2Q8JZQ2 802 aaKnown RBP12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Rab3il1Q8VDV3 383 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Synpo2Q91YE8 1087 aaKnown RBP12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Kif2bQ8C0N1 668 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Pde5aQ8CG03 865 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cabp5Q9JLK3 173 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Itsn1Q9Z0R4 1714 aa12.13□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cyp2d9P11714 504 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Krt39Q6IFX4 482 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Mtss1lQ6P9S0 715 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Krt222Q8CCX5 294 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 AdnpQ9Z103 1108 aaKnown RBP12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Tnrc6bQ8BKI2 1810 aaKnown RBP12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Dnajc21E9Q8D0 531 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Alppl2P24823 529 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Gngt1Q61012 74 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Zbtb39Q6PDK0 712 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Zranb2Q9R020 330 aaKnown RBP12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Slfn1Q9Z0I7 337 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 MetP16056 1379 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Crb1Q8VHS2 1405 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cyp2c67Q569X9 491 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Krt40Q6IFX3 439 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ppil4Q9CXG3 492 aaKnown RBP12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Mei1Q9D4I2 1268 aa12.12□□□□□ -0.47
Msh3-201ENSMUST00000022220 Gucy1b3O54865 620 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Bst2Q8R2Q8 172 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Nxf1Q99JX7 618 aaKnown RBP12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ndufb9Q9CQJ8 179 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Eif2ak3Q9Z2B5 1114 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Gm43638A0A0J9YU36 694 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Phldb3E9QAF4 648 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Grem2O88273 168 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Nap1l2P51860 460 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Exosc10P56960 887 aaKnown RBP12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Capza3P70190 299 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Glra4Q61603 456 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ctnna3Q65CL1 895 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Nme8Q715T0 586 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Tmem87aQ8BXN9 555 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Hgh1Q8C3I8 393 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Adcy3Q8VHH7 1145 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ribc1Q9D0B8 379 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Fam186bD3Z420 943 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Rnf40Q3U319 1001 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Kif5bQ61768 963 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Enox2Q8R0Z2 598 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 NapgQ9CWZ7 312 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Dydc1Q9D9T0 175 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ftsj3Q9DBE9 838 aaKnown RBP12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Pex3Q9QXY9 372 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Map3k15A2AQW0 1331 aa12.11□□□□□ -0.47
Msh3-201ENSMUST00000022220 Gm4758L7N258 96 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 RargP18911 458 aaKnown RBP12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Ccdc51Q3URS9 406 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Znf219Q6IQX8 726 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Hpcal4Q8BGZ1 191 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cdc23Q8BGZ4 597 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Cdk8Q8R3L8 464 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Dact1Q8R4A3 778 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Usp33Q8R5K2 909 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Saal1Q9D2C2 474 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Eddm13E9Q7F5 164 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Parp1P11103 1013 aaKnown RBP12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Sh3d21Q7TSG5 549 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Adcy2Q80TL1 1090 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Erlin1Q91X78 346 aa12.1□□□□□ -0.47
Msh3-201ENSMUST00000022220 Sh2b1Q91ZM2 756 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms