RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Nr2e3Q9QXZ7 395 aa12.86□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ccdc24E9PUW8 296 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tal1P22091 329 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Traf1P39428 409 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Asnsd1Q8BFS9 627 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Hpcal4Q8BGZ1 191 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 LarsQ8BMJ2 1178 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Yars2Q8BYL4 472 aaKnown RBP12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gpcpd1Q8C0L9 675 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ssr1Q9CY50 286 aaKnown RBP12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Gm36210A0A1B0GS00 229 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 ErmnQ5EBJ4 281 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Spag7Q7TNE3 227 aaKnown RBP12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Txndc5Q91W90 417 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Capn12Q9ER56 720 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Qtrt2B8ZXI1 415 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Krt78E9Q0F0 1068 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 NpcdF8VQB8 469 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 ByslO54825 436 aaKnown RBP12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cct5P80316 541 aaKnown RBP12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Slc7a1Q09143 622 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Saal1Q9D2C2 474 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Klhl40Q9D783 621 aa12.85□□□□□ -0.35
Herc4-201ENSMUST00000020258 Trpm3Q5F4S9 1721 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Calm1P0DP26 149 aaKnown RBP12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Calm2P0DP27 149 aaKnown RBP12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Calm3P0DP28 149 aaKnown RBP12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ighmbp2P40694 993 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Sap30bpQ02614 308 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Fez2Q6TYB5 348 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Kctd3Q8BFX3 815 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cabp7Q91ZM8 215 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 MeiocA2AG06 965 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Hps5P59438 1126 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Zfp781Q0P5U5 243 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Kiaa1468Q148V7 1216 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Bbof1Q3V079 533 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Brinp3Q499E0 766 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tmem232Q5K6N0 675 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ccdc172Q810N9 267 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Bicdl2Q8CHW5 507 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Vps33aQ9D2N9 598 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Cxcl11Q9JHH5 100 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Sipa1l2Q80TE4 1722 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Dlg5E9Q9R9 1921 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Art2aP17981 287 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Vsnl1P62761 191 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 HmmrQ00547 794 aaKnown RBP12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Tcp11Q01755 566 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Dok7Q18PE0 504 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 RragaQ80X95 313 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Sgsm1Q8BPQ7 1093 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Ubxn8Q9QZ49 277 aa12.84□□□□□ -0.35
Herc4-201ENSMUST00000020258 Sall1Q9ER74 1322 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Zfand4D3Z3C6 739 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Fam196bQ6GQV1 535 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ccdc148Q6P5U8 527 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 HlfQ8BW74 295 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Grin3bQ91ZU9 1003 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 NenfQ9CQ45 171 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 4932429P05RikA2ADI4 785 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ankrd63A2ARS0 390 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Gm1993A6X8I0 212 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 SlxD3Z347 212 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Gm5134E9QAB5 671 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Slc9a1Q61165 820 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ankrd23Q812A3 306 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Vps37cQ8R105 352 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Creld2Q9CYA0 350 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Tex13c2A0A0G2JGA3 530 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Igf2bp2Q5SF07 592 aaKnown RBP12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Myo1hQ9D6A1 958 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 AatfQ9JKX4 526 aaKnown RBP12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Plcb1Q9Z1B3 1216 aa12.83□□□□□ -0.36
Herc4-201ENSMUST00000020258 Mdh1P14152 334 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Abcb4P21440 1276 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 H2afxP27661 143 aaKnown RBP12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Sec31aQ3UPL0 1230 aaKnown RBP12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Lrrc36Q3V0M2 755 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ccdc42Q5SV66 316 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ankrd13aQ80UP5 588 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Tfap4Q9JIZ5 338 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Zfp853A0A1D5RM95 733 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Sar1bQ9CQC9 198 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Rims2Q9EQZ7 1530 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ube4aE9Q735 1028 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ube3aO08759 870 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Rc3h1Q4VGL6 1130 aaKnown RBP12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 KhnynQ80U38 671 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Fam161bQ8CB59 589 aa12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Prpf3Q922U1 683 aaKnown RBP12.82□□□□□ -0.36
Herc4-201ENSMUST00000020258 Prl2c3P04768 224 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Tlr8P58682 1032 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Gngt1Q61012 74 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Fermt2Q8CIB5 680 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Ndufv1Q91YT0 464 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Galnt15Q9D2N8 638 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Tubb4aQ9D6F9 444 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Kank3Q9Z1P7 791 aa12.81□□□□□ -0.36
Herc4-201ENSMUST00000020258 Pip4k2aO70172 405 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms