RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 FAL1Q12099 399 aaKnown RBP-1.44□□□□□ -2.64
snR40snR40 RLM1Q12224 676 aa-1.44□□□□□ -2.64
snR40snR40 PET123P17558 318 aa-1.45□□□□□ -2.64
snR40snR40 IMG2P25642 146 aaPredicted RBP-1.45□□□□□ -2.64
snR40snR40 CBF2P32504 956 aa-1.45□□□□□ -2.64
snR40snR40 AGA2P32781 87 aa-1.45□□□□□ -2.64
snR40snR40 CYM1P32898 989 aa-1.45□□□□□ -2.64
snR40snR40 MNN4P36044 1178 aa-1.45□□□□□ -2.64
snR40snR40 SPC34P36131 295 aa-1.45□□□□□ -2.64
snR40snR40 PIM1P36775 1133 aa-1.45□□□□□ -2.64
snR40snR40 SDH8P38345 138 aa-1.45□□□□□ -2.64
snR40snR40 DSS1P39112 969 aa-1.45□□□□□ -2.64
snR40snR40 YJL193WP39542 402 aa-1.45□□□□□ -2.64
snR40snR40 RPT2P40327 437 aaKnown RBP-1.45□□□□□ -2.64
snR40snR40 MIG2P53035 382 aa-1.45□□□□□ -2.64
snR40snR40 YNL034WP53963 612 aa-1.45□□□□□ -2.64
snR40snR40 ARP10Q04549 284 aa-1.45□□□□□ -2.64
snR40snR40 YDL242WQ07746 117 aa-1.45□□□□□ -2.64
snR40snR40 ENT4Q07872 247 aa-1.45□□□□□ -2.64
snR40snR40 MSC6Q08818 692 aaKnown RBP-1.45□□□□□ -2.64
snR40snR40 YPL191CQ08930 360 aa-1.45□□□□□ -2.64
snR40snR40 YOL098CQ12496 1037 aa-1.45□□□□□ -2.64
snR40snR40 ATR1P13090 542 aa-1.46□□□□□ -2.64
snR40snR40 VPS33P20795 691 aa-1.46□□□□□ -2.64
snR40snR40 MIH1P23748 554 aa-1.46□□□□□ -2.64
snR40snR40 PRP45P28004 379 aaPredicted RBP-1.46□□□□□ -2.64
snR40snR40 HEM12P32347 362 aaPredicted RBP-1.46□□□□□ -2.64
snR40snR40 PMU1P36069 295 aa-1.46□□□□□ -2.64
snR40snR40 GAT2P40209 560 aa-1.46□□□□□ -2.64
snR40snR40 CRH1P53301 507 aa-1.46□□□□□ -2.64
snR40snR40 TDA7P53882 636 aaPredicted RBP-1.46□□□□□ -2.64
snR40snR40 RGM1Q00453 211 aa-1.46□□□□□ -2.64
snR40snR40 MAK10Q02197 733 aa-1.46□□□□□ -2.64
snR40snR40 RBA50Q04418 439 aa-1.46□□□□□ -2.64
snR40snR40 FAP7Q12055 197 aaPredicted RBP-1.46□□□□□ -2.64
snR40snR40 HAT1Q12341 374 aa-1.46□□□□□ -2.64
snR40snR40 PSK1P31374 1356 aa-1.47□□□□□ -2.64
snR40snR40 YER145C-AA0A023PYF4 145 aa-1.47□□□□□ -2.64
snR40snR40 TFS1P14306 219 aa-1.47□□□□□ -2.64
snR40snR40 PHO84P25297 587 aaKnown RBP-1.47□□□□□ -2.64
snR40snR40 RNA14P25298 677 aaKnown RBP-1.47□□□□□ -2.64
snR40snR40 NRG2P38082 220 aa-1.47□□□□□ -2.64
snR40snR40 NUG1P40010 520 aaKnown RBP-1.47□□□□□ -2.64
snR40snR40 PEA2P40091 420 aa-1.47□□□□□ -2.64
snR40snR40 RGI2P40188 164 aa-1.47□□□□□ -2.64
snR40snR40 PFD1P46988 109 aa-1.47□□□□□ -2.64
snR40snR40 ASI1P54074 624 aa-1.47□□□□□ -2.64
snR40snR40 EDE1P34216 1381 aa-1.47□□□□□ -2.65
snR40snR40 PFK2P16862 959 aaKnown RBP RIP-Chip data-1.48□□□□□ -2.65not detected
snR40snR40 KGD2P19262 463 aaPredicted RBP-1.48□□□□□ -2.65
snR40snR40 SFL1P20134 766 aa-1.48□□□□□ -2.65
snR40snR40 NUP2P32499 720 aa-1.48□□□□□ -2.65
snR40snR40 CYS4P32582 507 aaKnown RBP-1.48□□□□□ -2.65
snR40snR40 DSS4P32601 143 aa-1.48□□□□□ -2.65
snR40snR40 PRM2P40534 656 aa-1.48□□□□□ -2.65
snR40snR40 ALR2P43553 858 aa-1.48□□□□□ -2.65
snR40snR40 YDL183CP48569 320 aa-1.48□□□□□ -2.65
snR40snR40 HEF3P53978 1044 aaKnown RBP-1.48□□□□□ -2.65
snR40snR40 YKU80Q04437 629 aa-1.48□□□□□ -2.65
snR40snR40 SUB2Q07478 446 aaKnown RBP-1.48□□□□□ -2.65
snR40snR40 AIM41Q12032 185 aa-1.48□□□□□ -2.65
snR40snR40 CBP3P21560 335 aa-1.49□□□□□ -2.65
snR40snR40 ACH1P32316 526 aa-1.49□□□□□ -2.65
snR40snR40 YKU70P32807 602 aa-1.49□□□□□ -2.65
snR40snR40 MNR2P35724 969 aa-1.49□□□□□ -2.65
snR40snR40 YKL069WP36088 180 aa-1.49□□□□□ -2.65
snR40snR40 STB1P42845 420 aa-1.49□□□□□ -2.65
snR40snR40 ALG2P43636 503 aa-1.49□□□□□ -2.65
snR40snR40 MYO5Q04439 1219 aaKnown RBP-1.49□□□□□ -2.65
snR40snR40 HRI1Q05905 244 aaKnown RBP-1.49□□□□□ -2.65
snR40snR40 YCG1Q06680 1035 aa-1.49□□□□□ -2.65
snR40snR40 SSA1P10591 642 aaKnown RBP-1.5□□□□□ -2.65
snR40snR40 ATE1P16639 503 aa-1.5□□□□□ -2.65
snR40snR40 SIP2P34164 415 aaKnown RBP-1.5□□□□□ -2.65
snR40snR40 RPN10P38886 268 aaKnown RBP-1.5□□□□□ -2.65
snR40snR40 PAN6P40459 309 aa-1.5□□□□□ -2.65
snR40snR40 DLD2P46681 530 aaKnown RBP-1.5□□□□□ -2.65
snR40snR40 GPD1Q00055 391 aaKnown RBP-1.5□□□□□ -2.65
snR40snR40 ADE3P07245 946 aaKnown RBP-1.51□□□□□ -2.65
snR40snR40 PUT3P25502 979 aaPredicted RBP-1.51□□□□□ -2.65
snR40snR40 STE5P32917 917 aa-1.51□□□□□ -2.65
snR40snR40 PPQ1P32945 549 aa-1.51□□□□□ -2.65
snR40snR40 YBR225WP38321 900 aa-1.51□□□□□ -2.65
snR40snR40 YTA12P40341 825 aa-1.51□□□□□ -2.65
snR40snR40 GAB1P41733 394 aa-1.51□□□□□ -2.65
snR40snR40 UTP8P53276 713 aaKnown RBP-1.51□□□□□ -2.65
snR40snR40 PEX25Q02969 394 aa-1.51□□□□□ -2.65
snR40snR40 FMP45Q07651 309 aa-1.51□□□□□ -2.65
snR40snR40 CUE5Q08412 411 aaKnown RBP-1.51□□□□□ -2.65
snR40snR40 ESA1Q08649 445 aa-1.51□□□□□ -2.65
snR40snR40 SSF2Q12153 453 aaPredicted RBP-1.51□□□□□ -2.65
snR40snR40 ARG81P05085 880 aa-1.52□□□□□ -2.65
snR40snR40 CIT2P08679 460 aa-1.52□□□□□ -2.65
snR40snR40 CPR1P14832 162 aaKnown RBP-1.52□□□□□ -2.65
snR40snR40 GSY1P23337 708 aa-1.52□□□□□ -2.65
snR40snR40 DPH2P32461 534 aa-1.52□□□□□ -2.65
snR40snR40 MTC7P32633 139 aa-1.52□□□□□ -2.65
snR40snR40 CBF5P33322 483 aaKnown RBP RIP-Chip data-1.52□□□□□ -2.65not detected
snR40snR40 YBL081WP38180 368 aaKnown RBP-1.52□□□□□ -2.65
snR40snR40 TAF4P50105 388 aa-1.52□□□□□ -2.65
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms