RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W MRP10O75012 95 aa3.67□□□□□ -1.82
MSD1YPL104W ATP1P07251 545 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W SSC1P0CS90 654 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W MET16P18408 261 aaPredicted RBP3.67□□□□□ -1.82
MSD1YPL104W AMS1P22855 1083 aa3.67□□□□□ -1.82
MSD1YPL104W CDC20P26309 610 aa3.67□□□□□ -1.82
MSD1YPL104W DSS4P32601 143 aa3.67□□□□□ -1.82
MSD1YPL104W YBR056WP38081 501 aa3.67□□□□□ -1.82
MSD1YPL104W YSW1P38280 609 aa3.67□□□□□ -1.82
MSD1YPL104W OTU2P38747 307 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W FSH1P38777 243 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W IES5P40060 125 aa3.67□□□□□ -1.82
MSD1YPL104W NEO1P40527 1151 aa3.67□□□□□ -1.82
MSD1YPL104W MAF1P41910 395 aa3.67□□□□□ -1.82
MSD1YPL104W GUS1P46655 708 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
MSD1YPL104W LIA1P47120 325 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W YGR127WP53275 312 aa3.67□□□□□ -1.82
MSD1YPL104W LSC1P53598 329 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W SLT2Q00772 484 aa3.67□□□□□ -1.82
MSD1YPL104W YPL034WQ03083 165 aa3.67□□□□□ -1.82
MSD1YPL104W SPG3Q04398 127 aaPredicted RBP3.67□□□□□ -1.82
MSD1YPL104W ADE13Q05911 482 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W AAD15Q08361 143 aa3.67□□□□□ -1.82
MSD1YPL104W CUE5Q08412 411 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W LEA1Q08963 238 aaPredicted RBP3.67□□□□□ -1.82
MSD1YPL104W SPE3Q12074 293 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W AI5_ALPHAQ9ZZX1 630 aa3.67□□□□□ -1.82
MSD1YPL104W CDC4P07834 779 aa3.67□□□□□ -1.82
MSD1YPL104W GPA2P10823 449 aa3.67□□□□□ -1.82
MSD1YPL104W PRP16P15938 1071 aaPredicted RBP3.67□□□□□ -1.82
MSD1YPL104W YIH1P25637 258 aa3.67□□□□□ -1.82
MSD1YPL104W URA10P30402 227 aa3.67□□□□□ -1.82
MSD1YPL104W PRP19P32523 503 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W KES1P35844 434 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W ETR1P38071 380 aa3.67□□□□□ -1.82
MSD1YPL104W YRO2P38079 344 aa3.67□□□□□ -1.82
MSD1YPL104W YBR032WP38223 100 aa3.67□□□□□ -1.82
MSD1YPL104W YBR062CP38239 180 aa3.67□□□□□ -1.82
MSD1YPL104W YBP1P38315 674 aa3.67□□□□□ -1.82
MSD1YPL104W BIT2P38346 545 aa3.67□□□□□ -1.82
MSD1YPL104W RIM4P38741 713 aa3.67□□□□□ -1.82
MSD1YPL104W PPE1P38796 400 aa3.67□□□□□ -1.82
MSD1YPL104W LAM1P38851 1228 aa3.67□□□□□ -1.82
MSD1YPL104W LIN1P38852 340 aaPredicted RBP3.67□□□□□ -1.82
MSD1YPL104W FHL1P39521 936 aa3.67□□□□□ -1.82
MSD1YPL104W STL1P39932 569 aa3.67□□□□□ -1.82
MSD1YPL104W OPT1P40897 799 aa3.67□□□□□ -1.82
MSD1YPL104W ERR3P42222 437 aa3.67□□□□□ -1.82
MSD1YPL104W TDA10P42938 290 aa3.67□□□□□ -1.82
MSD1YPL104W YFL040WP43562 540 aa3.67□□□□□ -1.82
MSD1YPL104W YJL132WP47014 750 aa3.67□□□□□ -1.82
MSD1YPL104W UBX4P54730 416 aa3.67□□□□□ -1.82
MSD1YPL104W MTD1Q02046 320 aaKnown RBP3.67□□□□□ -1.82
MSD1YPL104W SPO71Q03868 1245 aa3.67□□□□□ -1.82
MSD1YPL104W GRX8Q05926 109 aa3.67□□□□□ -1.82
MSD1YPL104W NRT1Q08485 598 aa3.67□□□□□ -1.82
MSD1YPL104W YLR053CQ12026 108 aa3.67□□□□□ -1.82
MSD1YPL104W HOS1Q12214 470 aa3.67□□□□□ -1.82
MSD1YPL104W ARP7Q12406 477 aa3.67□□□□□ -1.82
MSD1YPL104W HIS1P00498 297 aaKnown RBP3.66□□□□□ -1.82
MSD1YPL104W CAD1P24813 409 aaKnown RBP3.66□□□□□ -1.82
MSD1YPL104W PCL2P25693 308 aa3.66□□□□□ -1.82
MSD1YPL104W NIP1P32497 812 aaKnown RBP3.66□□□□□ -1.82
MSD1YPL104W AIM26P32858 118 aa3.66□□□□□ -1.82
MSD1YPL104W PEX5P35056 612 aa3.66□□□□□ -1.82
MSD1YPL104W YAT2P40017 923 aa3.66□□□□□ -1.82
MSD1YPL104W DPH1P40487 425 aaKnown RBP3.66□□□□□ -1.82
MSD1YPL104W RPS10BP46784 105 aaKnown RBP3.66□□□□□ -1.82
MSD1YPL104W YJR096WP47137 282 aa3.66□□□□□ -1.82
MSD1YPL104W BIO4P53630 237 aa3.66□□□□□ -1.82
MSD1YPL104W MET14Q02196 202 aa3.66□□□□□ -1.82
MSD1YPL104W ARA2Q04212 335 aa3.66□□□□□ -1.82
MSD1YPL104W YET3Q07451 203 aa3.66□□□□□ -1.82
MSD1YPL104W RPS10AQ08745 105 aaPredicted RBP3.66□□□□□ -1.82
MSD1YPL104W SOG2Q08817 791 aa3.66□□□□□ -1.82
MSD1YPL104W YPL225WQ08971 146 aaKnown RBP3.66□□□□□ -1.82
MSD1YPL104W GNT1Q12096 491 aa3.66□□□□□ -1.82
MSD1YPL104W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
MSD1YPL104W GAL1P04385 528 aa3.65□□□□□ -1.82
MSD1YPL104W MAS1P10507 462 aa3.65□□□□□ -1.82
MSD1YPL104W GID7P25569 745 aa3.65□□□□□ -1.82
MSD1YPL104W AAD3P25612 363 aa3.65□□□□□ -1.82
MSD1YPL104W PMI40P29952 429 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W HEM12P32347 362 aaPredicted RBP3.65□□□□□ -1.82
MSD1YPL104W HSP78P33416 811 aa3.65□□□□□ -1.82
MSD1YPL104W SPC29P33419 253 aa3.65□□□□□ -1.82
MSD1YPL104W ECM13P38195 257 aa3.65□□□□□ -1.82
MSD1YPL104W HEK2P38199 381 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
MSD1YPL104W KAP104P38217 918 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W SIF2P38262 535 aa3.65□□□□□ -1.82
MSD1YPL104W YEL028WP39989 153 aa3.65□□□□□ -1.82
MSD1YPL104W EDC3P39998 551 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W ATM1P40416 690 aa3.65□□□□□ -1.82
MSD1YPL104W YFL052WP43551 465 aa3.65□□□□□ -1.82
MSD1YPL104W NUP85P46673 744 aa3.65□□□□□ -1.82
MSD1YPL104W TY4A-JP47023 414 aa3.65□□□□□ -1.82
MSD1YPL104W BFA1P47113 574 aa3.65□□□□□ -1.82
MSD1YPL104W VPS25P47142 202 aa3.65□□□□□ -1.82
MSD1YPL104W TAF6P53040 516 aa3.65□□□□□ -1.82
MSD1YPL104W SPC105P53148 917 aa3.65□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms