RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W SKI8Q02793 397 aaPredicted RBP6.39□□□□□ -1.39
GEF1YJR040W ELP3Q02908 557 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W DCS1Q06151 350 aa6.39□□□□□ -1.39
GEF1YJR040W CDD1Q06549 142 aa6.39□□□□□ -1.39
GEF1YJR040W CDA1Q06702 301 aa6.39□□□□□ -1.39
GEF1YJR040W YDL073WQ07454 984 aa6.39□□□□□ -1.39
GEF1YJR040W RPN13O13563 156 aa6.39□□□□□ -1.39
GEF1YJR040W MF(ALPHA)1P01149 165 aa6.39□□□□□ -1.39
GEF1YJR040W ATP1P07251 545 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W PET494P07390 489 aaPredicted RBP6.39□□□□□ -1.39
GEF1YJR040W MAE1P36013 669 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W NTR2P36118 322 aaPredicted RBP6.39□□□□□ -1.39
GEF1YJR040W PCM1P38628 557 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W RAD55P38953 406 aa6.39□□□□□ -1.39
GEF1YJR040W GDH3P39708 457 aa6.39□□□□□ -1.39
GEF1YJR040W MMF1P40185 145 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W OPT1P40897 799 aa6.39□□□□□ -1.39
GEF1YJR040W SNZ3P43545 298 aa6.39□□□□□ -1.39
GEF1YJR040W ZAP1P47043 880 aa6.39□□□□□ -1.39
GEF1YJR040W EMC2P47133 292 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W PSP1P50896 841 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W SNZ2P53824 298 aa6.39□□□□□ -1.39
GEF1YJR040W COX20Q04935 205 aa6.39□□□□□ -1.39
GEF1YJR040W KAP95Q06142 861 aaKnown RBP6.39□□□□□ -1.39
GEF1YJR040W NOT5Q12514 560 aaPredicted RBP6.39□□□□□ -1.39
GEF1YJR040W LEU1P07264 779 aaKnown RBP6.38□□□□□ -1.39
GEF1YJR040W FRE1P32791 686 aa6.38□□□□□ -1.39
GEF1YJR040W YBR139WP38109 508 aa6.38□□□□□ -1.39
GEF1YJR040W KAP104P38217 918 aaKnown RBP6.38□□□□□ -1.39
GEF1YJR040W MGS1P40151 587 aa6.38□□□□□ -1.39
GEF1YJR040W TAH11P47112 604 aa6.38□□□□□ -1.39
GEF1YJR040W TRF5P48561 642 aaKnown RBP6.38□□□□□ -1.39
GEF1YJR040W COG2P53271 262 aa6.38□□□□□ -1.39
GEF1YJR040W SPC98P53540 846 aa6.38□□□□□ -1.39
GEF1YJR040W EAR1Q03212 550 aa6.38□□□□□ -1.39
GEF1YJR040W YMR209CQ03648 457 aa6.38□□□□□ -1.39
GEF1YJR040W PIB1Q06651 286 aa6.38□□□□□ -1.39
GEF1YJR040W AAD15Q08361 143 aa6.38□□□□□ -1.39
GEF1YJR040W MCH5Q08777 521 aa6.38□□□□□ -1.39
GEF1YJR040W YRR1Q12172 810 aa6.38□□□□□ -1.39
GEF1YJR040W PKH2Q12236 1081 aaKnown RBP6.38□□□□□ -1.39
GEF1YJR040W ADF1Q2V2Q1 113 aa6.38□□□□□ -1.39
GEF1YJR040W YPK1P12688 680 aaKnown RBP6.38□□□□□ -1.39
GEF1YJR040W NMT1P14743 455 aa6.38□□□□□ -1.39
GEF1YJR040W SAN1P22470 610 aa6.38□□□□□ -1.39
GEF1YJR040W PHO89P38361 574 aa6.38□□□□□ -1.39
GEF1YJR040W SHU2P38957 223 aa6.38□□□□□ -1.39
GEF1YJR040W HXT6P39003 570 aaKnown RBP6.38□□□□□ -1.39
GEF1YJR040W HXT7P39004 570 aa6.38□□□□□ -1.39
GEF1YJR040W GCD10P41814 478 aa6.38□□□□□ -1.39
GEF1YJR040W IRC5P43610 853 aa6.38□□□□□ -1.39
GEF1YJR040W YNR021WP53723 404 aaKnown RBP6.38□□□□□ -1.39
GEF1YJR040W GYP1Q08484 637 aa6.38□□□□□ -1.39
GEF1YJR040W REC8Q12188 680 aa6.38□□□□□ -1.39
GEF1YJR040W RPL6BP05739 176 aaKnown RBP6.37□□□□□ -1.39
GEF1YJR040W SEN2P16658 377 aa6.37□□□□□ -1.39
GEF1YJR040W TSR4P25040 408 aa6.37□□□□□ -1.39
GEF1YJR040W SBA1P28707 216 aaKnown RBP6.37□□□□□ -1.39
GEF1YJR040W SEC1P30619 724 aaKnown RBP6.37□□□□□ -1.39
GEF1YJR040W CYM1P32898 989 aa6.37□□□□□ -1.39
GEF1YJR040W MNN2P38069 597 aa6.37□□□□□ -1.39
GEF1YJR040W AGP2P38090 596 aa6.37□□□□□ -1.39
GEF1YJR040W YBL036CP38197 257 aa6.37□□□□□ -1.39
GEF1YJR040W IFA38P38286 347 aa6.37□□□□□ -1.39
GEF1YJR040W RPH1P39956 796 aa6.37□□□□□ -1.39
GEF1YJR040W JHD1P40034 492 aa6.37□□□□□ -1.39
GEF1YJR040W MDE1P47095 244 aa6.37□□□□□ -1.39
GEF1YJR040W NUT1P53114 1132 aa6.37□□□□□ -1.39
GEF1YJR040W NMA2P53204 395 aa6.37□□□□□ -1.39
GEF1YJR040W CWC25P53854 179 aaKnown RBP6.37□□□□□ -1.39
GEF1YJR040W YMR160WQ03823 816 aa6.37□□□□□ -1.39
GEF1YJR040W GLO2Q05584 274 aa6.37□□□□□ -1.39
GEF1YJR040W SYO1Q07395 620 aa6.37□□□□□ -1.39
GEF1YJR040W AIM39Q08223 395 aa6.37□□□□□ -1.39
GEF1YJR040W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
GEF1YJR040W APC9Q12107 265 aa6.37□□□□□ -1.39
GEF1YJR040W ATP16Q12165 160 aa6.37□□□□□ -1.39
GEF1YJR040W AI5_ALPHAQ9ZZX1 630 aa6.37□□□□□ -1.39
GEF1YJR040W YCR015CP25616 317 aa6.37□□□□□ -1.39
GEF1YJR040W SPR1P32603 445 aa6.37□□□□□ -1.39
GEF1YJR040W YBR284WP38150 797 aa6.37□□□□□ -1.39
GEF1YJR040W CKB2P38930 258 aa6.37□□□□□ -1.39
GEF1YJR040W SSP120P39931 234 aaKnown RBP6.37□□□□□ -1.39
GEF1YJR040W UBP7P40453 1071 aa6.37□□□□□ -1.39
GEF1YJR040W YFL012WP43580 148 aa6.37□□□□□ -1.39
GEF1YJR040W MET12P46151 657 aa6.37□□□□□ -1.39
GEF1YJR040W GCD14P46959 383 aaPredicted RBP6.37□□□□□ -1.39
GEF1YJR040W RTA1P53047 317 aa6.37□□□□□ -1.39
GEF1YJR040W NOG1Q02892 647 aaKnown RBP6.37□□□□□ -1.39
GEF1YJR040W YEL077CQ3E7X8 1277 aa6.37□□□□□ -1.39
GEF1YJR040W ATP2P00830 511 aaKnown RBP6.36□□□□□ -1.39
GEF1YJR040W CLN2P20438 545 aa6.36□□□□□ -1.39
GEF1YJR040W TKL2P33315 681 aa6.36□□□□□ -1.39
GEF1YJR040W APD1P38281 316 aa6.36□□□□□ -1.39
GEF1YJR040W LYS9P38999 446 aa6.36□□□□□ -1.39
GEF1YJR040W XDJ1P39102 459 aa6.36□□□□□ -1.39
GEF1YJR040W SEO1P39709 593 aa6.36□□□□□ -1.39
GEF1YJR040W SER33P40510 469 aa6.36□□□□□ -1.39
GEF1YJR040W YIL054WP40524 105 aa6.36□□□□□ -1.39
GEF1YJR040W ASG7P46993 209 aa6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms