RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W ECM32P32644 1121 aaKnown RBP3.56□□□□□ -1.84
BCD1YHR040W YBL055CP34220 418 aaPredicted RBP3.56□□□□□ -1.84
BCD1YHR040W CSG2P35206 410 aa3.56□□□□□ -1.84
BCD1YHR040W SDS22P36047 338 aa3.56□□□□□ -1.84
BCD1YHR040W ABZ1P37254 787 aaPredicted RBP3.56□□□□□ -1.84
BCD1YHR040W CCL1P37366 393 aa3.56□□□□□ -1.84
BCD1YHR040W REG2P38232 338 aa3.56□□□□□ -1.84
BCD1YHR040W MMS4P38257 691 aa3.56□□□□□ -1.84
BCD1YHR040W YSW1P38280 609 aa3.56□□□□□ -1.84
BCD1YHR040W POP4P38336 279 aa3.56□□□□□ -1.84
BCD1YHR040W PCA1P38360 1216 aa3.56□□□□□ -1.84
BCD1YHR040W NDT80P38830 627 aa3.56□□□□□ -1.84
BCD1YHR040W EAF5P39995 279 aa3.56□□□□□ -1.84
BCD1YHR040W RLP7P40693 322 aaKnown RBP3.56□□□□□ -1.84
BCD1YHR040W UBC9P50623 157 aaPredicted RBP3.56□□□□□ -1.84
BCD1YHR040W ZIP2P53061 704 aa3.56□□□□□ -1.84
BCD1YHR040W PCL10P53124 433 aa3.56□□□□□ -1.84
BCD1YHR040W TAM41P53230 385 aa3.56□□□□□ -1.84
BCD1YHR040W DRN1P53255 507 aaKnown RBP3.56□□□□□ -1.84
BCD1YHR040W GYL1Q04322 720 aa3.56□□□□□ -1.84
BCD1YHR040W GSF2Q04697 403 aaKnown RBP3.56□□□□□ -1.84
BCD1YHR040W IVY1Q04934 453 aa3.56□□□□□ -1.84
BCD1YHR040W YDL073WQ07454 984 aa3.56□□□□□ -1.84
BCD1YHR040W IES4Q08561 116 aa3.56□□□□□ -1.84
BCD1YHR040W MYO1P08964 1928 aa3.56□□□□□ -1.84
BCD1YHR040W DIF1O13577 133 aa3.55□□□□□ -1.84
BCD1YHR040W GAL10P04397 699 aa3.55□□□□□ -1.84
BCD1YHR040W PEP5P12868 1029 aa3.55□□□□□ -1.84
BCD1YHR040W SNA3P14359 133 aa3.55□□□□□ -1.84
BCD1YHR040W POL3P15436 1097 aa3.55□□□□□ -1.84
BCD1YHR040W SAN1P22470 610 aa3.55□□□□□ -1.84
BCD1YHR040W FUN30P31380 1131 aa3.55□□□□□ -1.84
BCD1YHR040W PAH1P32567 862 aa3.55□□□□□ -1.84
BCD1YHR040W MRE11P32829 692 aa3.55□□□□□ -1.84
BCD1YHR040W RGT1P32862 1170 aa3.55□□□□□ -1.84
BCD1YHR040W KDX1P36005 433 aa3.55□□□□□ -1.84
BCD1YHR040W NOP4P37838 685 aaKnown RBP3.55□□□□□ -1.84
BCD1YHR040W YMC2P38087 329 aa3.55□□□□□ -1.84
BCD1YHR040W APM3P38153 483 aa3.55□□□□□ -1.84
BCD1YHR040W FAT1P38225 669 aa3.55□□□□□ -1.84
BCD1YHR040W GDT1P38301 280 aaPredicted RBP3.55□□□□□ -1.84
BCD1YHR040W GIC1P38785 314 aa3.55□□□□□ -1.84
BCD1YHR040W PPE1P38796 400 aa3.55□□□□□ -1.84
BCD1YHR040W APE4P38821 490 aa3.55□□□□□ -1.84
BCD1YHR040W END3P39013 349 aa3.55□□□□□ -1.84
BCD1YHR040W CCT2P39076 527 aaKnown RBP3.55□□□□□ -1.84
BCD1YHR040W YMR134WP40207 237 aa3.55□□□□□ -1.84
BCD1YHR040W ULP2P40537 1034 aaPredicted RBP3.55□□□□□ -1.84
BCD1YHR040W CPR7P47103 393 aa3.55□□□□□ -1.84
BCD1YHR040W ASN1P49089 572 aaKnown RBP3.55□□□□□ -1.84
BCD1YHR040W PSP2P50109 593 aaKnown RBP3.55□□□□□ -1.84
BCD1YHR040W YML6P51998 286 aa3.55□□□□□ -1.84
BCD1YHR040W ARK1P53974 638 aa3.55□□□□□ -1.84
BCD1YHR040W MOT3P54785 490 aaKnown RBP3.55□□□□□ -1.84
BCD1YHR040W ROT1Q03691 256 aa3.55□□□□□ -1.84
BCD1YHR040W RCF1Q03713 159 aa3.55□□□□□ -1.84
BCD1YHR040W TDA9Q04545 1251 aa3.55□□□□□ -1.84
BCD1YHR040W COQ9Q05779 260 aa3.55□□□□□ -1.84
BCD1YHR040W YPR196WQ06595 470 aa3.55□□□□□ -1.84
BCD1YHR040W SIL1Q08199 421 aa3.55□□□□□ -1.84
BCD1YHR040W YBR182C-AQ8TGU6 64 aa3.55□□□□□ -1.84
BCD1YHR040W VPS5Q92331 675 aa3.55□□□□□ -1.84
BCD1YHR040W SEM1O94742 89 aa3.54□□□□□ -1.84
BCD1YHR040W HOM3P10869 527 aa3.54□□□□□ -1.84
BCD1YHR040W KAR3P17119 729 aa3.54□□□□□ -1.84
BCD1YHR040W ATP12P22135 325 aa3.54□□□□□ -1.84
BCD1YHR040W DAL2P25335 343 aa3.54□□□□□ -1.84
BCD1YHR040W YCL049CP25577 312 aa3.54□□□□□ -1.84
BCD1YHR040W YCR051WP25631 222 aa3.54□□□□□ -1.84
BCD1YHR040W CYS3P31373 394 aaKnown RBP3.54□□□□□ -1.84
BCD1YHR040W CBF2P32504 956 aa3.54□□□□□ -1.84
BCD1YHR040W TRM2P33753 639 aa3.54□□□□□ -1.84
BCD1YHR040W YKR051WP36142 418 aa3.54□□□□□ -1.84
BCD1YHR040W MRX3P38172 270 aa3.54□□□□□ -1.84
BCD1YHR040W AIM3P38266 947 aaKnown RBP3.54□□□□□ -1.84
BCD1YHR040W VHC1P38329 1120 aa3.54□□□□□ -1.84
BCD1YHR040W SRP68P38687 599 aaKnown RBP3.54□□□□□ -1.84
BCD1YHR040W LAM1P38851 1228 aa3.54□□□□□ -1.84
BCD1YHR040W SAP1P39955 897 aaKnown RBP3.54□□□□□ -1.84
BCD1YHR040W IRC24P40580 263 aa3.54□□□□□ -1.84
BCD1YHR040W SMK1P41808 388 aa3.54□□□□□ -1.84
BCD1YHR040W PHO86P46956 311 aa3.54□□□□□ -1.84
BCD1YHR040W UPF3P48412 387 aaKnown RBP3.54□□□□□ -1.84
BCD1YHR040W BRO1P48582 844 aa3.54□□□□□ -1.84
BCD1YHR040W RIM8P53179 542 aa3.54□□□□□ -1.84
BCD1YHR040W ARC35P53731 342 aaKnown RBP3.54□□□□□ -1.84
BCD1YHR040W NOP13P53883 403 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
BCD1YHR040W YNL146WP53906 100 aa3.54□□□□□ -1.84
BCD1YHR040W SLD5Q03406 294 aa3.54□□□□□ -1.84
BCD1YHR040W MSC2Q03455 724 aa3.54□□□□□ -1.84
BCD1YHR040W YMR027WQ04371 470 aa3.54□□□□□ -1.84
BCD1YHR040W APC5Q08683 685 aa3.54□□□□□ -1.84
BCD1YHR040W NCA2Q12374 616 aa3.54□□□□□ -1.84
BCD1YHR040W ERP3Q12403 225 aa3.54□□□□□ -1.84
BCD1YHR040W TRM11Q12463 433 aa3.54□□□□□ -1.84
BCD1YHR040W AI5_BETAQ9ZZX0 354 aa3.54□□□□□ -1.84
BCD1YHR040W RPS13P05756 151 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W YML002WP0CF17 737 aa3.53□□□□□ -1.84
BCD1YHR040W WHI2P12611 486 aa3.53□□□□□ -1.84
BCD1YHR040W SRV2P17555 526 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms