RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	OKP1	P53298	406 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	RMT2	Q03305	412 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	JIP4	Q03361	876 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	EBS1	Q03466	884 aa	Known RBP	5.11	□□□□□ -1.59
TUP1	YCR084C	DML1	Q03652	475 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	RSM24	Q03976	319 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	PPM1	Q04081	328 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	YLR455W	Q06188	304 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	YDR306C	Q06640	478 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	SNA4	Q07549	140 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	NSE1	Q07913	336 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	SDO1	Q07953	250 aa	Known RBP	5.11	□□□□□ -1.59
TUP1	YCR084C	PSF3	Q12146	194 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	HOS1	Q12214	470 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	NCA2	Q12374	616 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	MDM12	Q92328	271 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	RAD61	Q99359	647 aa		5.11	□□□□□ -1.59
TUP1	YCR084C	YPR089W	O13585	888 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	HIS4	P00815	799 aa	Known RBP	5.1	□□□□□ -1.59
TUP1	YCR084C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
TUP1	YCR084C	RPL24A	P04449	155 aa	Known RBP	5.1	□□□□□ -1.59
TUP1	YCR084C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
TUP1	YCR084C	MET17	P06106	444 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	KIN2	P13186	1147 aa	Known RBP	5.1	□□□□□ -1.59
TUP1	YCR084C	MSD1	P15179	658 aa	Known RBP	5.1	□□□□□ -1.59
TUP1	YCR084C	VPS1	P21576	704 aa	Known RBP	5.1	□□□□□ -1.59
TUP1	YCR084C	GIT1	P25346	518 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	PHO91	P27514	894 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	MLS1	P30952	554 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	YME1	P32795	747 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	EDS1	P38073	919 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	ICE2	P40499	491 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	TED1	P40533	473 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	PUS6	P53294	404 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	MUK1	Q02866	612 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	INA17	Q02888	182 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	DYN3	Q04949	312 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	NGL1	Q08213	363 aa	Known RBP	5.1	□□□□□ -1.59
TUP1	YCR084C	ESA1	Q08649	445 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	RUP1	Q12242	671 aa		5.1	□□□□□ -1.59
TUP1	YCR084C	REP1	P03871	373 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	ARG3	P05150	338 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	DCD1	P06773	312 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	UTR1	P21373	530 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	DBF2	P22204	572 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	CLB2	P24869	491 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	ADP1	P25371	1049 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	ILV6	P25605	309 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	IMG2	P25642	146 aa	Predicted RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	ADK2	P26364	225 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	ITR2	P30606	609 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	SMC1	P32908	1225 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	RPC34	P32910	317 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	TYE7	P33122	291 aa	Predicted RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	MCM7	P38132	845 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	IFA38	P38286	347 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	YEL068C	P39977	110 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	VFA1	P40080	203 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	RTS2	P40962	232 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
TUP1	YCR084C	MPS3	P47069	682 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	CUE3	P53137	624 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	COS6	P53344	381 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	SMA1	Q02651	245 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	MFB1	Q04922	465 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	DIN7	Q12086	430 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	LEU9	Q12166	604 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	YRR1	Q12172	810 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	UTP10	P42945	1769 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	CDC19	P00549	500 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	SNF1	P06782	633 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	YML002W	P0CF17	737 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	SRV2	P17555	526 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	OLE1	P21147	510 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	YJU3	P28321	313 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	FAA3	P39002	694 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	RCY1	P39531	840 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	YNL320W	P42840	284 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	YGL176C	P46945	554 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	YJR056C	P47115	236 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	HSV2	P50079	448 aa	Predicted RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	BIO3	P50277	480 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	KAP114	P53067	1004 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	LSC2	P53312	427 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	PRM1	P53835	661 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	RPT6	Q01939	405 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	LGE1	Q02796	332 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	BCP1	Q06338	283 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
TUP1	YCR084C	FMP25	Q08023	583 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	ZRT2	Q12436	422 aa		5.09	□□□□□ -1.59
TUP1	YCR084C	HTZ1	Q12692	134 aa	Known RBP	5.09	□□□□□ -1.59
TUP1	YCR084C	PPR1	P07272	904 aa	Predicted RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	RPL35A	P0CX84	120 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	RPL35B	P0CX85	120 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	GCN3	P14741	305 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	SEC63	P14906	663 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	OSM1	P21375	501 aa	Known RBP	5.08	□□□□□ -1.6
TUP1	YCR084C	AFT1	P22149	690 aa		5.08	□□□□□ -1.6
TUP1	YCR084C	BUD23	P25627	275 aa	Predicted RBP	5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms