RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	ECM2	P38241	364 aa	Known RBP	4.65	□□□□□ -1.67
VHC1	YBR235W	DED81	P38707	554 aa	Known RBP	4.65	□□□□□ -1.67
VHC1	YBR235W	SEC31	P38968	1273 aa	Known RBP	4.65	□□□□□ -1.67
VHC1	YBR235W	DIM1	P41819	318 aa	Known RBP	4.65	□□□□□ -1.67
VHC1	YBR235W	RSM26	P47141	266 aa		4.65	□□□□□ -1.67
VHC1	YBR235W	ALO1	P54783	526 aa	Known RBP	4.65	□□□□□ -1.67
VHC1	YBR235W	VTH2	P40890	1549 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	TDH1	P00360	332 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	RNR3	P21672	869 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	RRT12	P25381	491 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	PGS1	P25578	521 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	HEM3	P28789	327 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	MEI5	P32489	222 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	AGX1	P43567	385 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	CWC23	P52868	283 aa	Predicted RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	PAL1	Q05518	499 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	BCP1	Q06338	283 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	YPR196W	Q06595	470 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	LUC7	Q07508	261 aa	Predicted RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	FRE5	Q08908	694 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	FEX1	Q08913	375 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	RPS24A	P0CX31	135 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	RPS24B	P0CX32	135 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	ABF1	P14164	731 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	PTP2	P29461	750 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	SER1	P33330	395 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	GRX7	P38068	203 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	RCK2	P38623	610 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	STB5	P38699	743 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	STT3	P39007	718 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	STM1	P39015	273 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	COS4	P43542	379 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	COS1	P53822	381 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	YNL115C	P53925	644 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	YDR249C	Q03787	373 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	SPC2	Q04969	178 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	GRC3	Q07845	632 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	ERG11	P10614	530 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	CCA1	P21269	546 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	VMA16	P23968	213 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	BCK2	P33306	851 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	NEM1	P38757	446 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	GYP8	P43570	497 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	GUF1	P46943	645 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	GLG2	P47011	380 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	MRK1	P50873	501 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	PPT1	P53043	513 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	YGR111W	P53265	400 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	MRX10	Q05648	414 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	YLR407W	Q06070	228 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	FMP40	Q08968	688 aa	Predicted RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	LYS21	Q12122	440 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	HAL9	Q12180	1030 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	OSW2	Q12202	724 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	PAA1	Q12447	191 aa	Known RBP	4.64	□□□□□ -1.67
VHC1	YBR235W	ADF1	Q2V2Q1	113 aa		4.64	□□□□□ -1.67
VHC1	YBR235W	VTH1	P40438	1549 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
VHC1	YBR235W	HIS5	P07172	385 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	MATALPHA2	P0CY08	210 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	HMLALPHA2	P0CY09	210 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	HPR1	P17629	752 aa	Known RBP	4.63	□□□□□ -1.67
VHC1	YBR235W	AAC3	P18238	307 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	ACE2	P21192	770 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	AMD2	P22580	549 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	SUR1	P33300	382 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	YKL100C	P34248	587 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	ELF1	P36053	145 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	RGI1	P40043	161 aa	Predicted RBP	4.63	□□□□□ -1.67
VHC1	YBR235W	UBP7	P40453	1071 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	CSM2	P40465	213 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	ROK1	P45818	564 aa	Predicted RBP	4.63	□□□□□ -1.67
VHC1	YBR235W	COX16	P47081	118 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	TOM22	P49334	152 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	TAD1	P53065	400 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	SCS7	Q03529	384 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	YET2	Q04210	160 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
VHC1	YBR235W	THI21	Q08975	551 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	FEX2	Q08991	375 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	ULA1	Q12059	462 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	TAH18	Q12181	623 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	TMA7	Q3E764	64 aa	Known RBP	4.63	□□□□□ -1.67
VHC1	YBR235W	RSF2	P46974	1380 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	FOB1	O13329	566 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	GAL10	P04397	699 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
VHC1	YBR235W	MAS1	P10507	462 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	ECM25	P32525	599 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	SEC61	P32915	480 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	TOD6	P34219	525 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	YPT52	P36018	234 aa	Known RBP	4.63	□□□□□ -1.67
VHC1	YBR235W	MRPL7	P36519	292 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	BCD1	P38772	366 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	MIT1	P40002	666 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	YER010C	P40011	234 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	PSF2	P40359	213 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	EMP47	P43555	445 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	RCF2	P53721	224 aa		4.63	□□□□□ -1.67
VHC1	YBR235W	PGA2	P53903	129 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms