RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 RAG1P15918 1043 aa18.29■□□□□ 0.52
SRRM4-204ENST00000641899 ERCC3P19447 782 aa18.29■□□□□ 0.52
SRRM4-204ENST00000641899 PLS1Q14651 629 aa18.29■□□□□ 0.52
SRRM4-204ENST00000641899 LRRC41Q15345 812 aa18.29■□□□□ 0.52
SRRM4-204ENST00000641899 CCDC174Q6PII3 467 aa18.29■□□□□ 0.52
SRRM4-204ENST00000641899 NCAPG2Q86XI2 1143 aa18.29■□□□□ 0.52
SRRM4-204ENST00000641899 MAGEB6Q8N7X4 407 aa18.29■□□□□ 0.52
SRRM4-204ENST00000641899 PIH1D3Q9NQM4 214 aaKnown RBP18.29■□□□□ 0.52
SRRM4-204ENST00000641899 MAST2Q6P0Q8 1798 aa18.28■□□□□ 0.52
SRRM4-204ENST00000641899 SLC25A27O95847 323 aa18.28■□□□□ 0.52
SRRM4-204ENST00000641899 IGHA2P01877 340 aa18.28■□□□□ 0.52
SRRM4-204ENST00000641899 CLTBP09497 229 aa18.28■□□□□ 0.52
SRRM4-204ENST00000641899 TJAP1Q5JTD0 557 aa18.28■□□□□ 0.52
SRRM4-204ENST00000641899 ANO1Q5XXA6 986 aa18.28■□□□□ 0.52
SRRM4-204ENST00000641899 XPNPEP3Q9NQH7 507 aa18.28■□□□□ 0.52
SRRM4-204ENST00000641899 TLE2Q04725 743 aa18.27■□□□□ 0.52
SRRM4-204ENST00000641899 FRAT1Q92837 279 aaPredicted RBP18.27■□□□□ 0.52
SRRM4-204ENST00000641899 FERMT2Q96AC1 680 aa18.27■□□□□ 0.52
SRRM4-204ENST00000641899 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.52
SRRM4-204ENST00000641899 TTYH1Q9H313 450 aaPredicted RBP18.27■□□□□ 0.52
SRRM4-204ENST00000641899 ARHGEF10LQ9HCE6 1279 aa18.27■□□□□ 0.52
SRRM4-204ENST00000641899 PHF24Q9UPV7 400 aa18.27■□□□□ 0.52
SRRM4-204ENST00000641899 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.26■□□□□ 0.51
SRRM4-204ENST00000641899 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.26■□□□□ 0.51
SRRM4-204ENST00000641899 FLOT1O75955 427 aa18.26■□□□□ 0.51
SRRM4-204ENST00000641899 TRIM27P14373 513 aa18.26■□□□□ 0.51
SRRM4-204ENST00000641899 SHMT1P34896 483 aa18.26■□□□□ 0.51
SRRM4-204ENST00000641899 FPGSQ05932 587 aa18.26■□□□□ 0.51
SRRM4-204ENST00000641899 SEPT2Q15019 361 aa18.26■□□□□ 0.51
SRRM4-204ENST00000641899 TTF1Q15361 905 aaPredicted RBP18.26■□□□□ 0.51
SRRM4-204ENST00000641899 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
SRRM4-204ENST00000641899 MAGEB6P1A0A0J9YX57 407 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 TRIM43BA6NCK2 446 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 DCDC2CA8MYV0 355 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 COBLO75128 1261 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 COPB2P35606 906 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 POLA2Q14181 598 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 SSH3Q8TE77 659 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 TRIM43Q96BQ3 446 aaPredicted RBP18.25■□□□□ 0.51
SRRM4-204ENST00000641899 MAML3Q96JK9 1138 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 TMEM39AQ9NV64 488 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 SWAP70Q9UH65 585 aa18.25■□□□□ 0.51
SRRM4-204ENST00000641899 SIPA1L1O43166 1804 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 KIAA0355O15063 1070 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 DSG3P32926 999 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 PLCD1P51178 756 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 KCTD2Q14681 263 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 FAM47AQ5JRC9 791 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 AMOTL1Q8IY63 956 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 DBNLQ9UJU6 430 aaKnown RBP18.24■□□□□ 0.51
SRRM4-204ENST00000641899 CNPY2Q9Y2B0 182 aa18.24■□□□□ 0.51
SRRM4-204ENST00000641899 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
SRRM4-204ENST00000641899 TNFRSF10AO00220 468 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 PQBP1O60828 265 aaKnown RBP18.23■□□□□ 0.51
SRRM4-204ENST00000641899 AKR1A1P14550 325 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 PRAMEF19Q5SWL8 479 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 SH3RF1Q7Z6J0 888 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 ERC1Q8IUD2 1116 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 CLUAP1Q96AJ1 413 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 TOX2Q96NM4 488 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 GAS2L1Q99501 681 aaPredicted RBP18.23■□□□□ 0.51
SRRM4-204ENST00000641899 MMP19Q99542 508 aa18.23■□□□□ 0.51
SRRM4-204ENST00000641899 TSEN34Q9BSV6 310 aaKnown RBP18.23■□□□□ 0.51
SRRM4-204ENST00000641899 CCDC8Q9H0W5 538 aaPredicted RBP18.23■□□□□ 0.51
SRRM4-204ENST00000641899 WDR46O15213 610 aaKnown RBP18.22■□□□□ 0.51
SRRM4-204ENST00000641899 DNAJB2P25686 324 aa18.22■□□□□ 0.51
SRRM4-204ENST00000641899 GABPAQ06546 454 aa18.22■□□□□ 0.51
SRRM4-204ENST00000641899 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
SRRM4-204ENST00000641899 NOP58Q9Y2X3 529 aaKnown RBP18.22■□□□□ 0.51
SRRM4-204ENST00000641899 VCANP13611 3396 aa18.22■□□□□ 0.51
SRRM4-204ENST00000641899 MROH7Q68CQ1 1323 aa18.22■□□□□ 0.51
SRRM4-204ENST00000641899 MOXD2PA6NHM9 499 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 GUCY1A2P33402 732 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
SRRM4-204ENST00000641899 SLC44A5Q8NCS7 719 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 TIFAQ96CG3 184 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 DDRGK1Q96HY6 314 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 CCDC17Q96LX7 622 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 TINF2Q9BSI4 451 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 ZNF576Q9H609 170 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 STARD7Q9NQZ5 370 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 ZNF236Q9UL36 1845 aa18.21■□□□□ 0.51
SRRM4-204ENST00000641899 A0A1W2PQ45 241 aaPredicted RBP18.2■□□□□ 0.5
SRRM4-204ENST00000641899 A0A1W2PQY0 241 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 A0A1W2PRG0 241 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 BCAR3O75815 825 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 ICA1Q05084 483 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 SLC9C2Q5TAH2 1124 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 ZKSCAN2Q63HK3 967 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 ANKRD33Q7Z3H0 272 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 FTSJ3Q8IY81 847 aaKnown RBP18.2■□□□□ 0.5
SRRM4-204ENST00000641899 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
SRRM4-204ENST00000641899 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
SRRM4-204ENST00000641899 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 RIOK1Q9BRS2 568 aaKnown RBP18.2■□□□□ 0.5
SRRM4-204ENST00000641899 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
SRRM4-204ENST00000641899 SPC25Q9HBM1 224 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms